RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 FCMRO60667 390 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 SUPT3HO75486 399 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 RSPH10BP0C881 870 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 GKN3PP0CG01 181 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 PTMSP20962 102 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 SLC2A5P22732 501 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 SMARCB1Q12824 385 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 MRPL28Q13084 256 aaKnown RBP3.03□□□□□ -1.92
PFDN4-202ENST00000441080 MADCAM1Q13477 382 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 OR2A2Q6IF42 318 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 CASC1Q6TDU7 716 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 EFL1Q7Z2Z2 1120 aaKnown RBP3.03□□□□□ -1.92
PFDN4-202ENST00000441080 TBC1D21Q8IYX1 336 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 BHLHE23Q8NDY6 225 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 VN1R2Q8NFZ6 395 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 OR1L4Q8NGR5 311 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 OR2G3Q8NGZ4 309 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 ASB9Q96DX5 294 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 TCEANC2Q96MN5 208 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 GPR61Q9BZJ8 451 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 PLA2G2FQ9BZM2 168 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 VCXQ9H320 206 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 CDC42EP4Q9H3Q1 356 aaKnown RBP3.03□□□□□ -1.92
PFDN4-202ENST00000441080 PATZ1Q9HBE1 687 aaKnown RBP3.03□□□□□ -1.92
PFDN4-202ENST00000441080 SGK2Q9HBY8 427 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 ADAP2Q9NPF8 381 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 EXD2Q9NVH0 621 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 RBAKQ9NYW8 714 aaPredicted RBP3.03□□□□□ -1.92
PFDN4-202ENST00000441080 SPATA7Q9P0W8 599 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 XCL2Q9UBD3 114 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 PCYOX1Q9UHG3 505 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 ARHGAP21Q5T5U3 1957 aa3.03□□□□□ -1.92
PFDN4-202ENST00000441080 IGLV3-22A0A075B6J6 115 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 A0A096LNJ9 63 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 C11orf94C9JXX5 98 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 PEX7O00628 323 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 OR7A10O76100 309 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 CSF3P09919 207 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 TCN1P20061 433 aaPredicted RBP3.02□□□□□ -1.93
PFDN4-202ENST00000441080 CNR1P21554 472 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 CD1CP29017 333 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 EPS15P42566 896 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 CXCL5P42830 114 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 SEC61GP60059 68 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 SGCAQ16586 387 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 IMMTQ16891 758 aaKnown RBP3.02□□□□□ -1.93
PFDN4-202ENST00000441080 KCTD19Q17RG1 926 aaPredicted RBP3.02□□□□□ -1.93
PFDN4-202ENST00000441080 COA6Q5JTJ3 125 aaKnown RBP3.02□□□□□ -1.93
PFDN4-202ENST00000441080 KHDRBS2Q5VWX1 349 aaKnown RBP3.02□□□□□ -1.93
PFDN4-202ENST00000441080 CENPPQ6IPU0 288 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 CNIH2Q6PI25 160 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 ZNF679Q8IYX0 411 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 ZCCHC7Q8N3Z6 543 aaKnown RBP3.02□□□□□ -1.93
PFDN4-202ENST00000441080 TPRX1Q8N7U7 411 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 GIMAP1Q8WWP7 306 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 CEP170P1Q96L14 293 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 MS4A4EQ96PG1 132 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 OR8B4Q96RC9 309 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 PANX2Q96RD6 677 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 FMO2Q99518 471 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 NIPAL2Q9H841 368 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 LRRC40Q9H9A6 602 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 PSG11Q9UQ72 335 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 ATP10AO60312 1499 aa3.02□□□□□ -1.93
PFDN4-202ENST00000441080 CLRN2A0PK11 232 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 SS18L1O75177 396 aaPredicted RBP3.01□□□□□ -1.93
PFDN4-202ENST00000441080 SURF6O75683 361 aaKnown RBP3.01□□□□□ -1.93
PFDN4-202ENST00000441080 RORAP35398 523 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 LONP1P36776 959 aaKnown RBP3.01□□□□□ -1.93
PFDN4-202ENST00000441080 FDFT1P37268 417 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 FGF8P55075 233 aaPredicted RBP3.01□□□□□ -1.93
PFDN4-202ENST00000441080 FZD2Q14332 565 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 TMEM183BQ1AE95 376 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 ZBED5Q49AG3 693 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 TMEM255AQ5JRV8 349 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 OR52W1Q6IF63 320 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 TRIM40Q6P9F5 258 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 LRRC31Q6UY01 552 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 ZFP2Q6ZN57 461 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 TGIF2LXQ8IUE1 241 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 TMEM183AQ8IXX5 376 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 ZADH2Q8N4Q0 377 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 EIF1ADQ8N9N8 165 aaKnown RBP3.01□□□□□ -1.93
PFDN4-202ENST00000441080 IFT74Q96LB3 600 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 TAAR1Q96RJ0 339 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 CNN2Q99439 309 aaKnown RBP3.01□□□□□ -1.93
PFDN4-202ENST00000441080 NPY6RQ99463 290 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 SORT1Q99523 831 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 FAIM2Q9BWQ8 316 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 GON7Q9BXV9 100 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 DNTTIP1Q9H147 329 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 SLCO1B3Q9NPD5 702 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 TMCC3Q9ULS5 477 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 SCN2AQ99250 2005 aa3.01□□□□□ -1.93
PFDN4-202ENST00000441080 MTCL1Q9Y4B5 1905 aaKnown RBP3□□□□□ -1.93
PFDN4-202ENST00000441080 IGKV2D-24A0A075B6R9 120 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 BTBD17A6NE02 478 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 H3BNH8 94 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 HAS3O00219 553 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 MGRN1O60291 552 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms