RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 RABL2BQ9UNT1 228 aa8.3□□□□□ -1.08
HDAC6-209ENST00000440653 GRIP1Q9Y3R0 1128 aa8.3□□□□□ -1.08
HDAC6-209ENST00000440653 AKAP9Q99996 3911 aa8.3□□□□□ -1.08
HDAC6-209ENST00000440653 MED13Q9UHV7 2174 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 TEX13CA0A0J9YWL9 993 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 NPIPB13A6NJU9 1138 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 A8MUA0 341 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 NPIPB4C9JG80 1138 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 CPNE3O75131 537 aaKnown RBP8.29□□□□□ -1.08
HDAC6-209ENST00000440653 ALOX12BO75342 701 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 DLGAP3O95886 979 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 RENP00797 406 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 IGHMP01871 453 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 HLA-DQB1P01920 261 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 HEXBP07686 556 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 CXCR1P25024 350 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 TACR3P29371 465 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 CD79BP40259 229 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 RANBP1P43487 201 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 TGM4P49221 684 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 GABREP78334 506 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 DCDP81605 110 aaKnown RBP8.29□□□□□ -1.08
HDAC6-209ENST00000440653 ZNF85Q03923 595 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 SCN1BQ07699 218 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 ASAH1Q13510 395 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 CDK5R1Q15078 307 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 SGCBQ16585 318 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 VWA2Q5GFL6 755 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 ZNF362Q5T0B9 420 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-209ENST00000440653 C1orf189Q5VU69 101 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 FAM205BPQ63HN1 556 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 DMKNQ6E0U4 476 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-209ENST00000440653 GUSBP11Q6P575 273 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 RPL22L1Q6P5R6 122 aaKnown RBP8.29□□□□□ -1.08
HDAC6-209ENST00000440653 FAM131AQ6UXB0 335 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 BAIAP2L2Q6UXY1 529 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 FAM122BQ7Z309 247 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 KCTD20Q7Z5Y7 419 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 ANKRD37Q7Z713 158 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 PPP1R3BQ86XI6 285 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 C10orf53Q8N6V4 93 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 ZNF321PQ8N8H1 164 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 GATSQ8NAP1 163 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 CYB561A3Q8NBI2 242 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 NPEPL1Q8NDH3 523 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 OR4K13Q8NH42 304 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 STK35Q8TDR2 534 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 PTP4A1Q93096 173 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 TMEM203Q969S6 136 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 CLIP3Q96DZ5 547 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 POM121Q96HA1 1249 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 CCDC74BQ96LY2 380 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 LMF1Q96S06 567 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 LPAR4Q99677 370 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 ENKD1Q9H0I2 346 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.29□□□□□ -1.08
HDAC6-209ENST00000440653 ASCL3Q9NQ33 180 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 NPAP1Q9NZP6 1156 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 YARS2Q9Y2Z4 477 aaKnown RBP8.29□□□□□ -1.08
HDAC6-209ENST00000440653 IER3IP1Q9Y5U9 82 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 TMEM14AQ9Y6G1 99 aa8.29□□□□□ -1.08
HDAC6-209ENST00000440653 NAV3Q8IVL0 2385 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 PDZD2O15018 2839 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 UNC13CQ8NB66 2214 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 ARID1BQ8NFD5 2236 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-209ENST00000440653 TRAV1-2A0A0B4J238 106 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 LY6G6EA0A0G2JKS1 128 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 IGHV5-10-1A0A0J9YXX1 117 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 A0A1W2PQL4 384 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-209ENST00000440653 A1L4Q6 167 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 ANKUB1A6NFN9 424 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 VSTM2BA6NLU5 285 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 A8MU76 341 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 A8MVM7 634 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 IDSB3KWA1 339 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 ZNF879B4DU55 563 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 D6RAR5 112 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 CTDSP2O14595 271 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 GNB5O14775 395 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 SIGLEC6O43699 453 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 OR2T1O43869 369 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 FADS1O60427 444 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 SC5DO75845 299 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 AHSA1O95433 338 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 BGLAPP02818 100 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 MRPL3P09001 348 aaKnown RBP8.28□□□□□ -1.08
HDAC6-209ENST00000440653 RNF224P0DH78 156 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 FGF5P12034 268 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 MST1P26927 711 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 MAPK3P27361 379 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-209ENST00000440653 MSX1P28360 303 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 RBMS1P29558 406 aaKnown RBP8.28□□□□□ -1.08
HDAC6-209ENST00000440653 TALDO1P37837 337 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 PSMD7P51665 324 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 RNF4P78317 190 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 MXD1Q05195 221 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 IL11RAQ14626 422 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 GLYR1Q49A26 553 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-209ENST00000440653 FAM69AQ5T7M9 428 aa8.28□□□□□ -1.08
HDAC6-209ENST00000440653 ZNF385CQ66K41 422 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms