RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 KHDRBS3O75525 346 aaKnown RBP14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 PDGFAP04085 211 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 THEGLP0DJG4 465 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 CT45A8P0DMV1 189 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 CT45A9P0DMV2 189 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 ENPP1P22413 925 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 CDKN2AP42771 156 aaKnown RBP14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 P2RX1P51575 399 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 CLDN12P56749 244 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 RIPPLY1Q0D2K3 151 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 DEFB110Q30KQ9 67 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 CT45A2Q5DJT8 189 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 ZNF542PQ5EBM4 170 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 LEG1Q6P5S2 330 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 APOOLQ6UXV4 268 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 SLC16A9Q7RTY1 509 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 SERPINA12Q8IW75 414 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 SPICQ8N5J4 248 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 HAVCR1Q96D42 359 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 S100A16Q96FQ6 103 aaKnown RBP14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 UTP23Q9BRU9 249 aaKnown RBP14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 TSPAN10Q9H1Z9 355 aaPredicted RBP14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 SIT1Q9Y3P8 196 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 SPAG17Q6Q759 2223 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 A0A087WV48 116 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 UPK3AO75631 287 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 IGF2P01344 180 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 DHODHQ02127 395 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 NNATQ16517 81 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 TMEM69Q5SWH9 247 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 GLDNQ6ZMI3 551 aaPredicted RBP14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 STAC2Q6ZMT1 411 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 IDO2Q6ZQW0 420 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 FAM122BQ7Z309 247 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 FTMTQ8N4E7 242 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 BCORP1Q8N888 145 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 LRRC75AQ8NAA5 344 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 UXS1Q8NBZ7 420 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 OR4C3Q8NH37 302 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 CEP76Q8TAP6 659 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 SLC37A2Q8TED4 501 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 RBM18Q96H35 190 aaKnown RBP14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 Q96M85 177 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 CCNL2Q96S94 520 aaPredicted RBP14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 TCEAL2Q9H3H9 227 aaPredicted RBP14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 NARFLQ9H6Q4 476 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 KLK11Q9UBX7 282 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 KLHDC2Q9Y2U9 406 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 ETV7Q9Y603 341 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 TRBV5-5A0A0J9YX44 114 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 SPTY2D1-AS1A0A0U1RR47 76 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 OR5K3A6NET4 321 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 C4orf47A7E2U8 309 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 FAM171A2A8MVW0 826 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 ABHD16AO95870 558 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 IFNA16P05015 189 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 RNH1P13489 461 aaKnown RBP14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 APEHP13798 732 aaKnown RBP14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 CPN1P15169 458 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 ST6GAL1P15907 406 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 RAD52P43351 418 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 GPR3P46089 330 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 STX4Q12846 297 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 ZNF267Q14586 743 aaPredicted RBP14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 GRK1Q15835 563 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 Q499Y3 187 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 FAM220AQ7Z4H9 259 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 KCTD20Q7Z5Y7 419 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 COMMD7Q86VX2 200 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 JAZF1Q86VZ6 243 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 ZNF440Q8IYI8 595 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 ZNF511Q8NB15 262 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 OR2T4Q8NH00 348 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 NSMAFQ92636 917 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 MIB2Q96AX9 1013 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 SEC22CQ9BRL7 303 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 HCN3Q9P1Z3 774 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 MRM2Q9UI43 246 aaKnown RBP14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 MOKQ9UQ07 419 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 HIF3AQ9Y2N7 669 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 CLDN16Q9Y5I7 305 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 FKBP7Q9Y680 259 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 BDP1A6H8Y1 2624 aa14.92□□□□□ -0.02
CLCNKA-203ENST00000439316 A0A0A6YYC8 382 aaPredicted RBP14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 KIR2DS5A0A0G2JLQ3 304 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 A0A0G2JNG1 304 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 I3L1I5 382 aaPredicted RBP14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 KIR2DS3K7RE56 304 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 ACOT7O00154 380 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 CTNSO60931 367 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 TOXO94900 526 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 LDOC1O95751 146 aaPredicted RBP14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 CFDP00746 253 aaPredicted RBP14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 TACSTD2P09758 323 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 OR8G3PP0DMU2 310 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 ADRA2CP18825 462 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 CDK2P24941 298 aa14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 MAPK3P27361 379 aaPredicted RBP14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 MECP2P51608 486 aaKnown RBP14.91□□□□□ -0.02
CLCNKA-203ENST00000439316 RPS15P62841 145 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms