RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 ZNRF4Q8WWF5 429 aa12.89□□□□□ -0.35
CALD1-207ENST00000430085 ZBTB8AQ96BR9 441 aa12.89□□□□□ -0.35
CALD1-207ENST00000430085 MRPL48Q96GC5 212 aaKnown RBP12.89□□□□□ -0.35
CALD1-207ENST00000430085 C4orf36Q96KX1 117 aa12.89□□□□□ -0.35
CALD1-207ENST00000430085 JSRP1Q96MG2 331 aaPredicted RBP12.89□□□□□ -0.35
CALD1-207ENST00000430085 TM9SF2Q99805 663 aa12.89□□□□□ -0.35
CALD1-207ENST00000430085 FAM117AQ9C073 453 aa12.89□□□□□ -0.35
CALD1-207ENST00000430085 TXNIPQ9H3M7 391 aa12.89□□□□□ -0.35
CALD1-207ENST00000430085 SRA1Q9HD15 236 aaKnown RBP12.89□□□□□ -0.35
CALD1-207ENST00000430085 SH2D2AQ9NP31 389 aa12.89□□□□□ -0.35
CALD1-207ENST00000430085 TXNL4BQ9NX01 149 aaKnown RBP12.89□□□□□ -0.35
CALD1-207ENST00000430085 SF3B6Q9Y3B4 125 aaKnown RBP12.89□□□□□ -0.35
CALD1-207ENST00000430085 PTPRBP23467 1997 aa12.89□□□□□ -0.35
CALD1-207ENST00000430085 CPAMD8Q8IZJ3 1885 aa12.89□□□□□ -0.35
CALD1-207ENST00000430085 A0A087WZY1 265 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 SELENOFO60613 162 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 TFP02787 698 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 INHBBP09529 407 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 IL11P20809 199 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 ADH6P28332 368 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 OPRL1P41146 370 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 ID4P47928 161 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 HCCSP53701 268 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 TAS2R43P59537 309 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 PUDPQ08623 228 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 ZNF829Q3KNS6 432 aaPredicted RBP12.88□□□□□ -0.35
CALD1-207ENST00000430085 B3GNTL1Q67FW5 361 aaPredicted RBP12.88□□□□□ -0.35
CALD1-207ENST00000430085 H3F3CQ6NXT2 135 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 H1FNTQ75WM6 255 aaPredicted RBP12.88□□□□□ -0.35
CALD1-207ENST00000430085 OR5M1Q8NGP8 315 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 OR1J4Q8NGS1 313 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 TRMT61AQ96FX7 289 aaKnown RBP12.88□□□□□ -0.35
CALD1-207ENST00000430085 C5orf34Q96MH7 638 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 TSSK2Q96PF2 358 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 TIMP4Q99727 224 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 TMED9Q9BVK6 235 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 B3GNT4Q9C0J1 378 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 SYT4Q9H2B2 425 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 MMP27Q9H306 513 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 ALKBH4Q9NXW9 302 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 GSTK1Q9Y2Q3 226 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 LOC101059948A0A1B0GTJ6 334 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 METTL15A6NJ78 407 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 LIPT2A6NK58 231 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 G3V3Y1 287 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 TERTO14746 1132 aaKnown RBP12.88□□□□□ -0.35
CALD1-207ENST00000430085 SNPHO15079 494 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 EFNA2O43921 213 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 SNX4O95219 450 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 IGHMP01871 453 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 P04436 131 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 TLE3Q04726 772 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 SELENBP1Q13228 472 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 GPR50Q13585 617 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 ATP1A4Q13733 1029 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 GLYR1Q49A26 553 aaPredicted RBP12.88□□□□□ -0.35
CALD1-207ENST00000430085 ACER2Q5QJU3 275 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 LINC01590Q5TEZ4 76 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 ZNF468Q5VIY5 522 aaPredicted RBP12.88□□□□□ -0.35
CALD1-207ENST00000430085 C22orf42Q6IC83 251 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 EXD3Q8N9H8 876 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 OR6Q1Q8NGQ2 317 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 SLC25A43Q8WUT9 341 aaPredicted RBP12.88□□□□□ -0.35
CALD1-207ENST00000430085 SNX33Q8WV41 574 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 S100ZQ8WXG8 99 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 BORCS5Q969J3 196 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 THOC3Q96J01 351 aaKnown RBP12.88□□□□□ -0.35
CALD1-207ENST00000430085 KCTD7Q96MP8 289 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 TMEM185BQ9H7F4 350 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 HMG20AQ9NP66 347 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 CHST11Q9NPF2 352 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 ANKRD10Q9NXR5 420 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 MRPS18BQ9Y676 258 aaKnown RBP12.88□□□□□ -0.35
CALD1-207ENST00000430085 A3GALT2U3KPV4 340 aa12.88□□□□□ -0.35
CALD1-207ENST00000430085 ANKRD33BA6NCL7 494 aa12.87□□□□□ -0.35
CALD1-207ENST00000430085 HLA-DPB1P04440 258 aa12.87□□□□□ -0.35
CALD1-207ENST00000430085 IMPDH2P12268 514 aa12.87□□□□□ -0.35
CALD1-207ENST00000430085 LIFP15018 202 aa12.87□□□□□ -0.35
CALD1-207ENST00000430085 FKBP2P26885 142 aaKnown RBP12.87□□□□□ -0.35
CALD1-207ENST00000430085 DPP4P27487 766 aa12.87□□□□□ -0.35
CALD1-207ENST00000430085 OR12D2P58182 307 aa12.87□□□□□ -0.35
CALD1-207ENST00000430085 FABP5Q01469 135 aa12.87□□□□□ -0.35
CALD1-207ENST00000430085 ZP4Q12836 540 aa12.87□□□□□ -0.35
CALD1-207ENST00000430085 MYBPHQ13203 477 aa12.87□□□□□ -0.35
CALD1-207ENST00000430085 VASH1Q7L8A9 365 aaPredicted RBP12.87□□□□□ -0.35
CALD1-207ENST00000430085 SSX6Q7RTT6 188 aa12.87□□□□□ -0.35
CALD1-207ENST00000430085 PM20D2Q8IYS1 436 aa12.87□□□□□ -0.35
CALD1-207ENST00000430085 IL22RA1Q8N6P7 574 aa12.87□□□□□ -0.35
CALD1-207ENST00000430085 ZNF519Q8TB69 540 aa12.87□□□□□ -0.35
CALD1-207ENST00000430085 THAP4Q8WY91 577 aa12.87□□□□□ -0.35
CALD1-207ENST00000430085 COQ7Q99807 217 aa12.87□□□□□ -0.35
CALD1-207ENST00000430085 TTTY10Q9BZA0 68 aa12.87□□□□□ -0.35
CALD1-207ENST00000430085 C6orf62Q9GZU0 229 aaPredicted RBP12.87□□□□□ -0.35
CALD1-207ENST00000430085 DKKL1Q9UK85 242 aa12.87□□□□□ -0.35
CALD1-207ENST00000430085 B3GALT5Q9Y2C3 310 aa12.87□□□□□ -0.35
CALD1-207ENST00000430085 TRDV1A0A1B0GX56 115 aa12.86□□□□□ -0.35
CALD1-207ENST00000430085 PRSS37A4D1T9 235 aa12.86□□□□□ -0.35
CALD1-207ENST00000430085 CLDN25C9JDP6 229 aa12.86□□□□□ -0.35
CALD1-207ENST00000430085 NPIPA5E9PKD4 350 aa12.86□□□□□ -0.35
CALD1-207ENST00000430085 LRRTM2O43300 516 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms