RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 ALG10Q5BKT4 473 aa12.88□□□□□ -0.35
SGCE-204ENST00000428696 ZNF787Q6DD87 383 aa12.88□□□□□ -0.35
SGCE-204ENST00000428696 SLC35D2Q76EJ3 337 aa12.88□□□□□ -0.35
SGCE-204ENST00000428696 GPR137CQ8N3F9 429 aa12.88□□□□□ -0.35
SGCE-204ENST00000428696 OR6N1Q8NGY5 312 aa12.88□□□□□ -0.35
SGCE-204ENST00000428696 KISS1RQ969F8 398 aaPredicted RBP12.88□□□□□ -0.35
SGCE-204ENST00000428696 UTP4Q969X6 686 aaKnown RBP12.88□□□□□ -0.35
SGCE-204ENST00000428696 DHRS1Q96LJ7 313 aa12.88□□□□□ -0.35
SGCE-204ENST00000428696 MED18Q9BUE0 208 aa12.88□□□□□ -0.35
SGCE-204ENST00000428696 INIPQ9NRY2 104 aa12.88□□□□□ -0.35
SGCE-204ENST00000428696 IL20RAQ9UHF4 553 aa12.88□□□□□ -0.35
SGCE-204ENST00000428696 LOC102725191A0A1B0GVB3 256 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 UNC119BA6NIH7 251 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 M0R3G1 203 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 CDC42EP2O14613 210 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 CLOCKO15516 846 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 MAGEA2P43356 314 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 IST1P53990 364 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 CTXN1P60606 82 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 ZP4Q12836 540 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 KPNB1Q14974 876 aaKnown RBP12.87□□□□□ -0.35
SGCE-204ENST00000428696 ZSCAN26Q16670 478 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 ZBED5Q49AG3 693 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 FBXW10Q5XX13 1052 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 STAC2Q6ZMT1 411 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 Q6ZT83 130 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 TMPRSS11FQ6ZWK6 438 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 OR9Q2Q8NGE9 314 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 GNPDA2Q8TDQ7 276 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 GTPBP3Q969Y2 492 aaKnown RBP12.87□□□□□ -0.35
SGCE-204ENST00000428696 TMEM45BQ96B21 275 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 NDEL1Q9GZM8 345 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 SLCO5A1Q9H2Y9 848 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 CCM2LQ9NUG4 571 aaPredicted RBP12.87□□□□□ -0.35
SGCE-204ENST00000428696 VNN3Q9NY84 501 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 LYVE1Q9Y5Y7 322 aa12.87□□□□□ -0.35
SGCE-204ENST00000428696 ERICH4A6NGS2 130 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 ANKRD65E5RJM6 399 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 TRAF3IP2O43734 574 aaPredicted RBP12.86□□□□□ -0.35
SGCE-204ENST00000428696 UPK3AO75631 287 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 IGF2P01344 180 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 OMPP47874 163 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 ITGADQ13349 1161 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 P2RY6Q15077 328 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 SFRP5Q5T4F7 317 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 HMBOX1Q6NT76 420 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 BHLHA15Q7RTS1 189 aaPredicted RBP12.86□□□□□ -0.35
SGCE-204ENST00000428696 ZER1Q7Z7L7 766 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 DMRTC2Q8IXT2 367 aaPredicted RBP12.86□□□□□ -0.35
SGCE-204ENST00000428696 GABRG1Q8N1C3 465 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 POMGNT2Q8NAT1 580 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 SYT14Q8NB59 555 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 SLCO4A1Q96BD0 722 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 OR2M2Q96R28 347 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 HDHD5Q9BXW7 423 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 ACTR6Q9GZN1 396 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 ENKD1Q9H0I2 346 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 CRIM1Q9NZV1 1036 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 AP4S1Q9Y587 144 aa12.86□□□□□ -0.35
SGCE-204ENST00000428696 SH3D21A4FU49 640 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 ZNF587BE7ETH6 402 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 RAD51DO75771 328 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 HOXB6P17509 224 aaKnown RBP12.85□□□□□ -0.35
SGCE-204ENST00000428696 IGHV1-2P23083 117 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 SLC9A3P48764 834 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 DAP3P51398 398 aaKnown RBP12.85□□□□□ -0.35
SGCE-204ENST00000428696 ARHGDIAP52565 204 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 CLRN1P58418 232 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 ERVK-25P63136 954 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 ROR2Q01974 943 aaKnown RBP12.85□□□□□ -0.35
SGCE-204ENST00000428696 ACKR1Q16570 336 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 MICAQ29983 383 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 ABHD12BQ7Z5M8 362 aaPredicted RBP12.85□□□□□ -0.35
SGCE-204ENST00000428696 AQP11Q8NBQ7 271 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 STEAP2Q8NFT2 490 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 LIPHQ8WWY8 451 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 MARVELD3Q96A59 401 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 S100PBPQ96BU1 408 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 WFIKKN1Q96NZ8 548 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 ALKBH3Q96Q83 286 aaPredicted RBP12.85□□□□□ -0.35
SGCE-204ENST00000428696 GPA33Q99795 319 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 SPOCK3Q9BQ16 436 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 FUZQ9BT04 418 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 B3GAT2Q9NPZ5 323 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 DNAJB9Q9UBS3 223 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 RCE1Q9Y256 329 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 HIF3AQ9Y2N7 669 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 GPR52Q9Y2T5 361 aa12.85□□□□□ -0.35
SGCE-204ENST00000428696 ADGRG4Q8IZF6 3080 aa12.84□□□□□ -0.35
SGCE-204ENST00000428696 OR6C65A6NJZ3 312 aa12.84□□□□□ -0.35
SGCE-204ENST00000428696 GASTP01350 101 aa12.84□□□□□ -0.35
SGCE-204ENST00000428696 CSNK1A1P48729 337 aa12.84□□□□□ -0.35
SGCE-204ENST00000428696 HMGA2P52926 109 aa12.84□□□□□ -0.35
SGCE-204ENST00000428696 FOXG1P55316 489 aaPredicted RBP12.84□□□□□ -0.35
SGCE-204ENST00000428696 PRPS1P60891 318 aa12.84□□□□□ -0.35
SGCE-204ENST00000428696 SORDQ00796 357 aa12.84□□□□□ -0.35
SGCE-204ENST00000428696 PGBD2Q6P3X8 592 aa12.84□□□□□ -0.35
SGCE-204ENST00000428696 YTHDF3Q7Z739 585 aaKnown RBP12.84□□□□□ -0.35
SGCE-204ENST00000428696 AMIGO2Q86SJ2 522 aa12.84□□□□□ -0.35
SGCE-204ENST00000428696 WFDC8Q8IUA0 241 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms