RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 DEFA4P12838 97 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 PUDPQ08623 228 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 PCLAFQ15004 111 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 PPP1R3AQ16821 1122 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 PERM1Q5SV97 790 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 SPINK14Q6IE38 97 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 PLBD1Q6P4A8 553 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 PLET1Q6UQ28 207 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 GJC3Q8NFK1 279 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 LKAAEAR1Q8TD35 194 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 CCDC120Q96HB5 630 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 FOXN4Q96NZ1 517 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 BARHL1Q9BZE3 327 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 ANKRA2Q9H9E1 313 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 TMEM30AQ9NV96 361 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 WDR37Q9Y2I8 494 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 HRH3Q9Y5N1 445 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 FBP2O00757 339 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 SGCEO43556 437 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 RAB13P51153 203 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 PNLIPRP2P54317 469 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 GGTLC2Q14390 218 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 RGNQ15493 299 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 OR1Q1Q15612 314 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 ZDHHC24Q6UX98 284 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 CLIP4Q8N3C7 705 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 OR8J1Q8NGP2 316 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 CCDC107Q8WV48 283 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 ROBO4Q8WZ75 1007 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 FAM46BQ96A09 425 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 MS4A6EQ96DS6 147 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 ACPTQ9BZG2 426 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 APMAPQ9HDC9 416 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 PLEKHJ1Q9NW61 149 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 RASD1Q9Y272 281 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 ZNF443Q9Y2A4 671 aaPredicted RBP6.62□□□□□ -1.35
CNOT4-206ENST00000428680 EXOSC1Q9Y3B2 195 aaKnown RBP6.62□□□□□ -1.35
CNOT4-206ENST00000428680 ENPP4Q9Y6X5 453 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 LRRN3E7EW58 273 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 AIREO43918 545 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 YIF1AO95070 293 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 APOL3O95236 402 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 SERPINE2P07093 398 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 CELA2BP08218 269 aaPredicted RBP6.62□□□□□ -1.35
CNOT4-206ENST00000428680 SOX18P35713 384 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 LAPTM4AQ15012 233 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 C4orf46Q504U0 113 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 STEAP4Q687X5 459 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 ZNF534Q76KX8 674 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 SLC36A1Q7Z2H8 476 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 DPY19L4Q7Z388 723 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 MEX3DQ86XN8 651 aaKnown RBP6.62□□□□□ -1.35
CNOT4-206ENST00000428680 CHDHQ8NE62 594 aaPredicted RBP6.62□□□□□ -1.35
CNOT4-206ENST00000428680 OR5D14Q8NGL3 314 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 ADAMTS16Q8TE57 1224 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.62□□□□□ -1.35
CNOT4-206ENST00000428680 LRTOMTQ8WZ04 291 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 NELFAQ9H3P2 528 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 NT5DC2Q9H857 520 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 MALT1Q9UDY8 824 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 SCP2D1Q9UJQ7 156 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 ZNF222Q9UK12 451 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 KLK13Q9UKR3 277 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 PTPN13Q12923 2485 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 MYO18AQ92614 2054 aaKnown RBP6.62□□□□□ -1.35
CNOT4-206ENST00000428680 IGHV3-64DA0A0J9YX35 117 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 SLC35F4A4IF30 521 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 SAGE2PA6NJ88 616 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 AQP7O14520 342 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 FGF17O60258 216 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 OR8G3PP0DMU2 310 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 ETS2P15036 469 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 PRKACBP22694 351 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 SLC2A5P22732 501 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 HLCSP50747 726 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 IKZF1Q13422 519 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 RAB31Q13636 194 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 LY6DQ14210 128 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 AKIRIN2Q53H80 203 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 PRAMEF9Q5VWM5 478 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 SDR9C7Q8NEX9 313 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 OR51T1Q8NGJ9 327 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 CANT1Q8WVQ1 401 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 CCL17Q92583 94 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 NMD3Q96D46 503 aaKnown RBP6.62□□□□□ -1.35
CNOT4-206ENST00000428680 ZMYND19Q96E35 227 aaPredicted RBP6.62□□□□□ -1.35
CNOT4-206ENST00000428680 RTL8AQ9BWD3 113 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 MS4A7Q9GZW8 240 aaPredicted RBP6.62□□□□□ -1.35
CNOT4-206ENST00000428680 PAIP1Q9H074 479 aaKnown RBP6.62□□□□□ -1.35
CNOT4-206ENST00000428680 OR52A5Q9H2C5 316 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 SLC6A15Q9H2J7 730 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 CPNE5Q9HCH3 593 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 ACTR3BQ9P1U1 418 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 ANAPC1Q9H1A4 1944 aa6.62□□□□□ -1.35
CNOT4-206ENST00000428680 MCRIP1C9JLW8 97 aa6.61□□□□□ -1.35
CNOT4-206ENST00000428680 SPINT2O43291 252 aa6.61□□□□□ -1.35
CNOT4-206ENST00000428680 SPRY3O43610 288 aa6.61□□□□□ -1.35
CNOT4-206ENST00000428680 DNAJB6O75190 326 aa6.61□□□□□ -1.35
CNOT4-206ENST00000428680 PRKRAO75569 313 aaKnown RBP6.61□□□□□ -1.35
CNOT4-206ENST00000428680 CLEC3BP05452 202 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms