RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 ATP1A1-AS1Q5TC04 95 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 EEF1A1P5Q5VTE0 462 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 C1QL3Q5VWW1 255 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 NHLRC1Q6VVB1 395 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 LINC00696Q6ZRV3 163 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 ZBTB46Q86UZ6 589 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 SATL1Q86VE3 508 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 ACBD7Q8N6N7 88 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 NANOGP1Q8N7R0 232 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 EXD3Q8N9H8 876 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 FDCSPQ8NFU4 85 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 OR52E2Q8NGJ4 325 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 OR52I1Q8NGK6 324 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 RAB2BQ8WUD1 216 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 SNRNP27Q8WVK2 155 aaKnown RBP8.14□□□□□ -1.11
NR1I3-209ENST00000428574 CPNE4Q96A23 557 aaPredicted RBP8.14□□□□□ -1.11
NR1I3-209ENST00000428574 ADGRG7Q96K78 797 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 Q96M85 177 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 JSRP1Q96MG2 331 aaPredicted RBP8.14□□□□□ -1.11
NR1I3-209ENST00000428574 SFXN2Q96NB2 322 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 OXGR1Q96P68 337 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 TSPAN32Q96QS1 320 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 NPAS1Q99742 590 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 ZDHHC11Q9H8X9 412 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 MARCH7Q9H992 704 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 ANKRD10Q9NXR5 420 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 KLHL13Q9P2N7 655 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 TNFRSF10DQ9UBN6 386 aa8.14□□□□□ -1.11
NR1I3-209ENST00000428574 LSM2Q9Y333 95 aaKnown RBP8.14□□□□□ -1.11
NR1I3-209ENST00000428574 CAB39Q9Y376 341 aaPredicted RBP8.14□□□□□ -1.11
NR1I3-209ENST00000428574 ARPC4-TTLL3A0A0A6YYG9 625 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 TRIM64BA6NI03 449 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 EIF4E1BA6NMX2 242 aaKnown RBP8.13□□□□□ -1.11
NR1I3-209ENST00000428574 HSPB2A8KAH6 182 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 NPIPA5E9PKD4 350 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 G3V3Y1 287 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 MS4A18H0YCH9 400 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 PHYHO14832 338 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 MYL12BO14950 172 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 TLX3O43711 291 aaPredicted RBP8.13□□□□□ -1.11
NR1I3-209ENST00000428574 NOL3O60936 208 aaKnown RBP8.13□□□□□ -1.11
NR1I3-209ENST00000428574 TRMUO75648 421 aaKnown RBP8.13□□□□□ -1.11
NR1I3-209ENST00000428574 WISP1O95388 367 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 SLC2A10O95528 541 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 BCL10O95999 233 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 F13BP05160 661 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 SBK2P0C263 348 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 RFPL3SP0C7P2 107 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 OR2T7P0C7T2 308 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 CD53P19397 219 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 POU3F2P20265 443 aaPredicted RBP8.13□□□□□ -1.11
NR1I3-209ENST00000428574 IL11P20809 199 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 C21orf33P30042 268 aaPredicted RBP8.13□□□□□ -1.11
NR1I3-209ENST00000428574 ATP6V1E1P36543 226 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 MEOX1P50221 254 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 CCL11P51671 97 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 GTF2A1P52655 376 aaPredicted RBP8.13□□□□□ -1.11
NR1I3-209ENST00000428574 SLC16A1P53985 500 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 WNT4P56705 351 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 OR2B6P58173 313 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 TAS2R43P59537 309 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 ACTA2P62736 377 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 ACTG2P63267 376 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 MLLT11Q13015 90 aaPredicted RBP8.13□□□□□ -1.11
NR1I3-209ENST00000428574 MRPL28Q13084 256 aaKnown RBP8.13□□□□□ -1.11
NR1I3-209ENST00000428574 GPR50Q13585 617 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 SPHARQ15513 63 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 NEDD8Q15843 81 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 HSPB2Q16082 182 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 DEFB109BQ30KR1 87 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 MS4A18Q3C1V0 323 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 TIMM50Q3ZCQ8 353 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 MESTQ5EB52 335 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 RPUSD3Q6P087 351 aaKnown RBP8.13□□□□□ -1.11
NR1I3-209ENST00000428574 LEG1Q6P5S2 330 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 TMPRSS11AQ6ZMR5 421 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 GALNTL5Q7Z4T8 443 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 GGNQ86UU5 652 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 ANKRD13BQ86YJ7 626 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 UEVLDQ8IX04 471 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 SYS1Q8N2H4 156 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 ZADH2Q8N4Q0 377 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 SDR9C7Q8NEX9 313 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 OR2T27Q8NH04 317 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 OR4K13Q8NH42 304 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 OR6X1Q8NH79 312 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 OR2V1Q8NHB1 315 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 ASB10Q8WXI3 467 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 SGCDQ92629 289 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 INTS12Q96CB8 462 aaKnown RBP8.13□□□□□ -1.11
NR1I3-209ENST00000428574 KCNK17Q96T54 332 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 NMNAT3Q96T66 252 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 CNN2Q99439 309 aaKnown RBP8.13□□□□□ -1.11
NR1I3-209ENST00000428574 RHNO1Q9BSD3 238 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.13□□□□□ -1.11
NR1I3-209ENST00000428574 TSPAN10Q9H1Z9 355 aaPredicted RBP8.13□□□□□ -1.11
NR1I3-209ENST00000428574 CCDC86Q9H6F5 360 aaKnown RBP8.13□□□□□ -1.11
NR1I3-209ENST00000428574 GP6Q9HCN6 339 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 AMBNQ9NP70 447 aa8.13□□□□□ -1.11
NR1I3-209ENST00000428574 KLHL1Q9NR64 748 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms