RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 MCCC2Q9HCC0 563 aa21.63■■□□□ 1.05
VEGFA-209ENST00000425836 INIPQ9NRY2 104 aa21.63■■□□□ 1.05
VEGFA-209ENST00000425836 SLC7A10Q9NS82 523 aa21.63■■□□□ 1.05
VEGFA-209ENST00000425836 SPTBN1Q01082 2364 aaKnown RBP21.63■■□□□ 1.05
VEGFA-209ENST00000425836 SLC35F4A4IF30 521 aa21.62■■□□□ 1.05
VEGFA-209ENST00000425836 CLOCKO15516 846 aa21.62■■□□□ 1.05
VEGFA-209ENST00000425836 ADAP00813 363 aa21.62■■□□□ 1.05
VEGFA-209ENST00000425836 SNTB1Q13884 538 aaKnown RBP21.62■■□□□ 1.05
VEGFA-209ENST00000425836 ALG10Q5BKT4 473 aa21.62■■□□□ 1.05
VEGFA-209ENST00000425836 STAC2Q6ZMT1 411 aa21.62■■□□□ 1.05
VEGFA-209ENST00000425836 TMEM179BQ7Z7N9 219 aa21.62■■□□□ 1.05
VEGFA-209ENST00000425836 KIF18BQ86Y91 864 aa21.62■■□□□ 1.05
VEGFA-209ENST00000425836 LRRC75AQ8NAA5 344 aa21.62■■□□□ 1.05
VEGFA-209ENST00000425836 GNPDA2Q8TDQ7 276 aa21.62■■□□□ 1.05
VEGFA-209ENST00000425836 OR2M2Q96R28 347 aa21.62■■□□□ 1.05
VEGFA-209ENST00000425836 ENKD1Q9H0I2 346 aa21.62■■□□□ 1.05
VEGFA-209ENST00000425836 SLCO5A1Q9H2Y9 848 aa21.62■■□□□ 1.05
VEGFA-209ENST00000425836 SIGLEC7Q9Y286 467 aa21.62■■□□□ 1.05
VEGFA-209ENST00000425836 UNC119BA6NIH7 251 aa21.61■■□□□ 1.05
VEGFA-209ENST00000425836 ZNF26P17031 533 aaPredicted RBP21.61■■□□□ 1.05
VEGFA-209ENST00000425836 FPR3P25089 353 aa21.61■■□□□ 1.05
VEGFA-209ENST00000425836 LGALS3BPQ08380 585 aa21.61■■□□□ 1.05
VEGFA-209ENST00000425836 CXorf67Q86X51 503 aaPredicted RBP21.61■■□□□ 1.05
VEGFA-209ENST00000425836 TMEM123Q8N131 208 aa21.61■■□□□ 1.05
VEGFA-209ENST00000425836 MALT1Q9UDY8 824 aa21.61■■□□□ 1.05
VEGFA-209ENST00000425836 USP9YO00507 2555 aaPredicted RBP21.61■■□□□ 1.05
VEGFA-209ENST00000425836 A0A1W2PRG6 482 aa21.61■■□□□ 1.05
VEGFA-209ENST00000425836 AKAP8O43823 692 aaKnown RBP21.61■■□□□ 1.05
VEGFA-209ENST00000425836 GASTP01350 101 aa21.61■■□□□ 1.05
VEGFA-209ENST00000425836 DNAJA1P31689 397 aaKnown RBP21.61■■□□□ 1.05
VEGFA-209ENST00000425836 UGT2B10P36537 528 aa21.61■■□□□ 1.05
VEGFA-209ENST00000425836 GSSP48637 474 aa21.61■■□□□ 1.05
VEGFA-209ENST00000425836 BIDP55957 195 aa21.61■■□□□ 1.05
VEGFA-209ENST00000425836 PRPS1P60891 318 aa21.61■■□□□ 1.05
VEGFA-209ENST00000425836 SORDQ00796 357 aa21.61■■□□□ 1.05
VEGFA-209ENST00000425836 P2RY6Q15077 328 aa21.61■■□□□ 1.05
VEGFA-209ENST00000425836 POMGNT2Q8NAT1 580 aa21.61■■□□□ 1.05
VEGFA-209ENST00000425836 NTN4Q9HB63 628 aa21.61■■□□□ 1.05
VEGFA-209ENST00000425836 UPB1Q9UBR1 384 aa21.61■■□□□ 1.05
VEGFA-209ENST00000425836 DOPEY2Q9Y3R5 2298 aa21.6■■□□□ 1.05
VEGFA-209ENST00000425836 ZNF726A6NNF4 738 aa21.6■■□□□ 1.05
VEGFA-209ENST00000425836 C16orf97H3BN30 126 aa21.6■■□□□ 1.05
VEGFA-209ENST00000425836 HNRNPRO43390 633 aaKnown RBP21.6■■□□□ 1.05
VEGFA-209ENST00000425836 SLC43A1O75387 559 aa21.6■■□□□ 1.05
VEGFA-209ENST00000425836 DEAF1O75398 565 aaPredicted RBP21.6■■□□□ 1.05
VEGFA-209ENST00000425836 UPK3AO75631 287 aa21.6■■□□□ 1.05
VEGFA-209ENST00000425836 BCL10O95999 233 aa21.6■■□□□ 1.05
VEGFA-209ENST00000425836 IGHV1-2P23083 117 aa21.6■■□□□ 1.05
VEGFA-209ENST00000425836 CCKARP32238 428 aa21.6■■□□□ 1.05
VEGFA-209ENST00000425836 FAPQ12884 760 aa21.6■■□□□ 1.05
VEGFA-209ENST00000425836 TSPAN31Q12999 210 aa21.6■■□□□ 1.05
VEGFA-209ENST00000425836 MELKQ14680 651 aa21.6■■□□□ 1.05
VEGFA-209ENST00000425836 IGFN1Q86VF2 1251 aa21.6■■□□□ 1.05
VEGFA-209ENST00000425836 DMRTC2Q8IXT2 367 aaPredicted RBP21.6■■□□□ 1.05
VEGFA-209ENST00000425836 OR6X1Q8NH79 312 aa21.6■■□□□ 1.05
VEGFA-209ENST00000425836 PYDC1Q8WXC3 89 aa21.6■■□□□ 1.05
VEGFA-209ENST00000425836 ADAD1Q96M93 576 aaKnown RBP21.6■■□□□ 1.05
VEGFA-209ENST00000425836 SPOCK3Q9BQ16 436 aa21.6■■□□□ 1.05
VEGFA-209ENST00000425836 ASB6Q9NWX5 421 aa21.6■■□□□ 1.05
VEGFA-209ENST00000425836 OR6C65A6NJZ3 312 aa21.59■■□□□ 1.05
VEGFA-209ENST00000425836 E2F6O75461 281 aa21.59■■□□□ 1.05
VEGFA-209ENST00000425836 PSMB1P20618 241 aaKnown RBP21.59■■□□□ 1.05
VEGFA-209ENST00000425836 FOXG1P55316 489 aaPredicted RBP21.59■■□□□ 1.05
VEGFA-209ENST00000425836 FXYD6P3P58550 94 aa21.59■■□□□ 1.05
VEGFA-209ENST00000425836 CTXN1P60606 82 aa21.59■■□□□ 1.05
VEGFA-209ENST00000425836 ATP6AP1Q15904 470 aa21.59■■□□□ 1.05
VEGFA-209ENST00000425836 ACKR1Q16570 336 aa21.59■■□□□ 1.05
VEGFA-209ENST00000425836 SFRP5Q5T4F7 317 aa21.59■■□□□ 1.05
VEGFA-209ENST00000425836 CARD17Q5XLA6 110 aa21.59■■□□□ 1.05
VEGFA-209ENST00000425836 MEX3BQ6ZN04 569 aaKnown RBP21.59■■□□□ 1.05
VEGFA-209ENST00000425836 AQP11Q8NBQ7 271 aa21.59■■□□□ 1.05
VEGFA-209ENST00000425836 OR10G2Q8NGC3 310 aa21.59■■□□□ 1.05
VEGFA-209ENST00000425836 GIPC3Q8TF64 312 aa21.59■■□□□ 1.05
VEGFA-209ENST00000425836 LINC00470Q9BZP3 86 aa21.59■■□□□ 1.05
VEGFA-209ENST00000425836 ANKRD65E5RJM6 399 aa21.58■■□□□ 1.05
VEGFA-209ENST00000425836 PDLIM1O00151 329 aa21.58■■□□□ 1.05
VEGFA-209ENST00000425836 COX5AP20674 150 aa21.58■■□□□ 1.05
VEGFA-209ENST00000425836 FASP25445 335 aa21.58■■□□□ 1.05
VEGFA-209ENST00000425836 ITGADQ13349 1161 aa21.58■■□□□ 1.05
VEGFA-209ENST00000425836 CAMK2DQ13557 499 aa21.58■■□□□ 1.05
VEGFA-209ENST00000425836 TSC22D1Q15714 1073 aa21.58■■□□□ 1.05
VEGFA-209ENST00000425836 C20orf196Q8IYI0 205 aa21.58■■□□□ 1.05
VEGFA-209ENST00000425836 TXNIPQ9H3M7 391 aa21.58■■□□□ 1.05
VEGFA-209ENST00000425836 GPR52Q9Y2T5 361 aa21.58■■□□□ 1.05
VEGFA-209ENST00000425836 ADGRG4Q8IZF6 3080 aa21.58■■□□□ 1.05
VEGFA-209ENST00000425836 CACNA1CQ13936 2221 aa21.58■■□□□ 1.04
VEGFA-209ENST00000425836 NPIPB13A6NJU9 1138 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 NPIPB4C9JG80 1138 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 MCIDASD6RGH6 385 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 KRT33AO76009 404 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 NDUFB2O95178 105 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 DAP3P51398 398 aaKnown RBP21.57■■□□□ 1.04
VEGFA-209ENST00000425836 ARMC4Q5T2S8 1044 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 HIST2H2BCQ6DN03 193 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 THSD4Q6ZMP0 1018 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 LINGO2Q7L985 606 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 HS3ST5Q8IZT8 346 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 ASB10Q8WXI3 467 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 LRTOMTQ8WZ04 291 aa21.57■■□□□ 1.04
VEGFA-209ENST00000425836 LRR1Q96L50 414 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms