RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 DCLRE1CQ96SD1 692 aaKnown RBP23.87■■□□□ 1.41
LDB1-202ENST00000425280 TTTY10Q9BZA0 68 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 MS4A18H0YCH9 400 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 FGF9P31371 208 aaPredicted RBP23.87■■□□□ 1.41
LDB1-202ENST00000425280 MS4A18Q3C1V0 323 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 B3GNTL1Q67FW5 361 aaPredicted RBP23.87■■□□□ 1.41
LDB1-202ENST00000425280 SCAIQ8N9R8 606 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 DEFB124Q8NES8 71 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 OR2T4Q8NH00 348 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 S100ZQ8WXG8 99 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 SYT4Q9H2B2 425 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 SIAEQ9HAT2 523 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 HMG20AQ9NP66 347 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 SERINC1Q9NRX5 453 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 COPS3Q9UNS2 423 aa23.87■■□□□ 1.41
LDB1-202ENST00000425280 LIPT2A6NK58 231 aa23.86■■□□□ 1.41
LDB1-202ENST00000425280 XKRYO14609 159 aa23.86■■□□□ 1.41
LDB1-202ENST00000425280 SERPINA7P05543 415 aa23.86■■□□□ 1.41
LDB1-202ENST00000425280 BMP4P12644 408 aa23.86■■□□□ 1.41
LDB1-202ENST00000425280 ZP4Q12836 540 aa23.86■■□□□ 1.41
LDB1-202ENST00000425280 ZNF846Q147U1 533 aa23.86■■□□□ 1.41
LDB1-202ENST00000425280 GLYR1Q49A26 553 aaPredicted RBP23.86■■□□□ 1.41
LDB1-202ENST00000425280 H1FNTQ75WM6 255 aaPredicted RBP23.86■■□□□ 1.41
LDB1-202ENST00000425280 CROCCP3Q8IVE0 287 aa23.86■■□□□ 1.41
LDB1-202ENST00000425280 PM20D2Q8IYS1 436 aa23.86■■□□□ 1.41
LDB1-202ENST00000425280 MFSD4AQ8N468 514 aa23.86■■□□□ 1.41
LDB1-202ENST00000425280 C6orf62Q9GZU0 229 aaPredicted RBP23.86■■□□□ 1.41
LDB1-202ENST00000425280 KNTC1P50748 2209 aa23.86■■□□□ 1.41
LDB1-202ENST00000425280 RAD1O60671 282 aa23.85■■□□□ 1.41
LDB1-202ENST00000425280 GTF2E2P29084 291 aaKnown RBP23.85■■□□□ 1.41
LDB1-202ENST00000425280 PUDPQ08623 228 aa23.85■■□□□ 1.41
LDB1-202ENST00000425280 TBC1D25Q3MII6 688 aa23.85■■□□□ 1.41
LDB1-202ENST00000425280 TP53I3Q53FA7 332 aa23.85■■□□□ 1.41
LDB1-202ENST00000425280 EEF1A1P5Q5VTE0 462 aa23.85■■□□□ 1.41
LDB1-202ENST00000425280 KDM8Q8N371 416 aa23.85■■□□□ 1.41
LDB1-202ENST00000425280 PRSS33Q8NF86 280 aa23.85■■□□□ 1.41
LDB1-202ENST00000425280 NXPE2Q96DL1 559 aa23.85■■□□□ 1.41
LDB1-202ENST00000425280 KCTD7Q96MP8 289 aa23.85■■□□□ 1.41
LDB1-202ENST00000425280 SNTG1Q9NSN8 517 aa23.85■■□□□ 1.41
LDB1-202ENST00000425280 RYDENQ9NUL5 291 aaKnown RBP23.85■■□□□ 1.41
LDB1-202ENST00000425280 MRPS18BQ9Y676 258 aaKnown RBP23.85■■□□□ 1.41
LDB1-202ENST00000425280 LOC101059948A0A1B0GTJ6 334 aa23.85■■□□□ 1.41
LDB1-202ENST00000425280 MAGEB4O15481 346 aaPredicted RBP23.85■■□□□ 1.41
LDB1-202ENST00000425280 HLA-DPB1P04440 258 aa23.85■■□□□ 1.41
LDB1-202ENST00000425280 HLA-DOBP13765 273 aa23.85■■□□□ 1.41
LDB1-202ENST00000425280 C3orf33Q6P1S2 294 aa23.85■■□□□ 1.41
LDB1-202ENST00000425280 COQ7Q99807 217 aa23.85■■□□□ 1.41
LDB1-202ENST00000425280 HDHD5Q9BXW7 423 aa23.85■■□□□ 1.41
LDB1-202ENST00000425280 BARHL1Q9BZE3 327 aa23.85■■□□□ 1.41
LDB1-202ENST00000425280 WDR12Q9GZL7 423 aaKnown RBP23.85■■□□□ 1.41
LDB1-202ENST00000425280 CHST11Q9NPF2 352 aa23.85■■□□□ 1.41
LDB1-202ENST00000425280 G3V3Y1 287 aa23.84■■□□□ 1.41
LDB1-202ENST00000425280 SNPHO15079 494 aa23.84■■□□□ 1.41
LDB1-202ENST00000425280 CDRT1O95170 752 aa23.84■■□□□ 1.41
LDB1-202ENST00000425280 CAPZA2P47755 286 aa23.84■■□□□ 1.41
LDB1-202ENST00000425280 TAS2R43P59537 309 aa23.84■■□□□ 1.41
LDB1-202ENST00000425280 ACTA2P62736 377 aa23.84■■□□□ 1.41
LDB1-202ENST00000425280 ACTG2P63267 376 aa23.84■■□□□ 1.41
LDB1-202ENST00000425280 MYBPHQ13203 477 aa23.84■■□□□ 1.41
LDB1-202ENST00000425280 CDONQ4KMG0 1287 aa23.84■■□□□ 1.41
LDB1-202ENST00000425280 MDGA2Q7Z553 956 aa23.84■■□□□ 1.41
LDB1-202ENST00000425280 SYS1Q8N2H4 156 aa23.84■■□□□ 1.41
LDB1-202ENST00000425280 SYT14Q8NB59 555 aa23.84■■□□□ 1.41
LDB1-202ENST00000425280 SNX18Q96RF0 628 aa23.84■■□□□ 1.41
LDB1-202ENST00000425280 OCEL1Q9H607 264 aa23.84■■□□□ 1.41
LDB1-202ENST00000425280 ALKBH4Q9NXW9 302 aa23.84■■□□□ 1.41
LDB1-202ENST00000425280 GSTK1Q9Y2Q3 226 aa23.84■■□□□ 1.41
LDB1-202ENST00000425280 A0A1W2PRG6 482 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 PRSS37A4D1T9 235 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 TNFRSF10AO00220 468 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 GABRPO00591 440 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 ADH6P28332 368 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 EIF1P41567 113 aaKnown RBP23.83■■□□□ 1.41
LDB1-202ENST00000425280 C19orf57Q0VDD7 668 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 SLC16A9Q7RTY1 509 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 ZBTB8AQ96BR9 441 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 SGCZQ96LD1 299 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 NUAK2Q9H093 628 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 TMEM185BQ9H7F4 350 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 A0A087WZY1 265 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 FZD7O75084 574 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 TRIM3O75382 744 aaPredicted RBP23.83■■□□□ 1.41
LDB1-202ENST00000425280 IL1AP01583 271 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 LIFP15018 202 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 ATP1A4Q13733 1029 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 INSL4Q14641 139 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 MELKQ14680 651 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 RPTNQ6XPR3 784 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 TIGD4Q8IY51 512 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 ZNF248Q8NDW4 579 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 THAP4Q8WY91 577 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 ANKRD10Q9NXR5 420 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 GALNT8Q9NY28 637 aa23.83■■□□□ 1.41
LDB1-202ENST00000425280 VSX1Q9NZR4 365 aaPredicted RBP23.83■■□□□ 1.41
LDB1-202ENST00000425280 ANKRD33BA6NCL7 494 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 PLPP2O43688 288 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 OPN1LWP04000 364 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 TLE3Q04726 772 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 MXD1Q05195 221 aa23.82■■□□□ 1.4
LDB1-202ENST00000425280 INAQ16352 499 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms