RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 IL20RAQ9UHF4 553 aa13.56□□□□□ -0.24
CALD1-206ENST00000424922 SIGLEC7Q9Y286 467 aa13.56□□□□□ -0.24
CALD1-206ENST00000424922 ACACAQ13085 2346 aa13.56□□□□□ -0.24
CALD1-206ENST00000424922 TMED7-TICAM2A0A0A6YYA0 188 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 LRRN3E7EW58 273 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 HCN1O60741 890 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 PTP4A3O75365 173 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 SLC2A10O95528 541 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 P04436 131 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 ZNF41P51814 821 aaPredicted RBP13.55□□□□□ -0.24
CALD1-206ENST00000424922 CRTC2Q53ET0 693 aaPredicted RBP13.55□□□□□ -0.24
CALD1-206ENST00000424922 SMARCD3Q6STE5 483 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 SHFQ7M4L6 423 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 LHFPL3Q86UP9 236 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 ADGRG3Q86Y34 549 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 BBS1Q8NFJ9 593 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 OR4K17Q8NGC6 315 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 OR51A7Q8NH64 312 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 ST8SIA1Q92185 356 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 SGTBQ96EQ0 304 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 JSRP1Q96MG2 331 aaPredicted RBP13.55□□□□□ -0.24
CALD1-206ENST00000424922 INPP5EQ9NRR6 644 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 PLEKHB1Q9UF11 243 aaPredicted RBP13.55□□□□□ -0.24
CALD1-206ENST00000424922 TMED7Q9Y3B3 224 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 V9GYH0 126 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 APC2O95996 2303 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 LOC400499M0QZD8 3231 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 TRAV27A0A087WT01 109 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 TCEA1P23193 301 aaKnown RBP13.55□□□□□ -0.24
CALD1-206ENST00000424922 CD96P40200 585 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 SIGIRRQ6IA17 410 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 SPINK14Q6IE38 97 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 ZNF322Q6U7Q0 402 aaPredicted RBP13.55□□□□□ -0.24
CALD1-206ENST00000424922 OAFQ86UD1 273 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 PLCZ1Q86YW0 608 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 GPALPP1Q8IXQ4 340 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 LRRC17Q8N6Y2 441 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 FADS6Q8N9I5 356 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 SUN5Q8TC36 379 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 AP3S1Q92572 193 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 SACM1LQ9NTJ5 587 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 LRFN1Q9P244 771 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 ABI3Q9P2A4 366 aa13.55□□□□□ -0.24
CALD1-206ENST00000424922 SHISA8B8ZZ34 492 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 SUSD5O60279 629 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 HLA-DPB1P04440 258 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 ATP6V1E1P36543 226 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 HTR3AP46098 478 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 FABP5Q01469 135 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 PLBD1Q6P4A8 553 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 ACBD7Q8N6N7 88 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 C10orf53Q8N6V4 93 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 ARIH2OSQ8N7S6 290 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 TMEM203Q969S6 136 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 NTNG2Q96CW9 530 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 KTI12Q96EK9 354 aaPredicted RBP13.54□□□□□ -0.24
CALD1-206ENST00000424922 DNAJA3Q96EY1 480 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 GNRHR2Q96P88 292 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 UTP23Q9BRU9 249 aaKnown RBP13.54□□□□□ -0.24
CALD1-206ENST00000424922 PTGES2Q9H7Z7 377 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 PLA2G3Q9NZ20 509 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 POLHQ9Y253 713 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 A0A0G2JMM0 328 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 A0A1W2PPB8 328 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 A0A1W2PRS3 328 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 TMEM72A0PK05 275 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 ZC3H12DA2A288 527 aaKnown RBP13.54□□□□□ -0.24
CALD1-206ENST00000424922 SLC22A31A6NKX4 558 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 NOTOA8MTQ0 251 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 KIR3DP1A8MWS1 328 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 RGS5O15539 181 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 SLC25A12O75746 678 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 WDPCPO95876 746 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 LALBAP00709 142 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 APOA1P02647 267 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 PAICSP22234 425 aaKnown RBP13.54□□□□□ -0.24
CALD1-206ENST00000424922 SDC2P34741 201 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 CD79BP40259 229 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 CASRP41180 1078 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 RPS5P46782 204 aaKnown RBP13.54□□□□□ -0.24
CALD1-206ENST00000424922 DNASE1L1P49184 302 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 FOXK2Q01167 660 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 FOXF1Q12946 379 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 HNRNPA0Q13151 305 aaKnown RBP13.54□□□□□ -0.24
CALD1-206ENST00000424922 PLPPR5Q32ZL2 321 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 OR1J4Q8NGS1 313 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 CHAC2Q8WUX2 184 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 SPRYD4Q8WW59 207 aaPredicted RBP13.54□□□□□ -0.24
CALD1-206ENST00000424922 RELTQ969Z4 430 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 TNFRSF13CQ96RJ3 184 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 KATNB1Q9BVA0 655 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 ENKD1Q9H0I2 346 aa13.54□□□□□ -0.24
CALD1-206ENST00000424922 ZNF891A8MT65 544 aaPredicted RBP13.53□□□□□ -0.24
CALD1-206ENST00000424922 SNPHO15079 494 aa13.53□□□□□ -0.24
CALD1-206ENST00000424922 OR7A10O76100 309 aa13.53□□□□□ -0.24
CALD1-206ENST00000424922 C1QL3Q5VWW1 255 aa13.53□□□□□ -0.24
CALD1-206ENST00000424922 KCNE4Q8WWG9 221 aa13.53□□□□□ -0.24
CALD1-206ENST00000424922 TAAR8Q969N4 342 aa13.53□□□□□ -0.24
CALD1-206ENST00000424922 AGAP4Q96P64 663 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms