RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 APOBEC3HQ6NTF7 200 aaKnown RBP3.2□□□□□ -1.9
SF3B1-205ENST00000424674 PNCKQ6P2M8 343 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 EMBQ6PCB8 327 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 SHC4Q6S5L8 630 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 ATRAIDQ6UW56 229 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 METTL7BQ6UX53 244 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 RAD9BQ6WBX8 426 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 HACD2Q6Y1H2 254 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 C16orf82Q7Z2V1 217 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 NUFIP2Q7Z417 695 aaKnown RBP3.2□□□□□ -1.9
SF3B1-205ENST00000424674 ZNF554Q86TJ5 538 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 NT5DC3Q86UY8 548 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 HIPK1Q86Z02 1210 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 ZNF547Q8IVP9 402 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 DCP1BQ8IZD4 617 aaKnown RBP3.2□□□□□ -1.9
SF3B1-205ENST00000424674 HS3ST5Q8IZT8 346 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 GVQW1Q8N7I0 195 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 TPRX1Q8N7U7 411 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 RELL2Q8NC24 303 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-205ENST00000424674 LFNGQ8NES3 379 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 OR4D9Q8NGE8 314 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 OR2D3Q8NGH3 330 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 OR5M9Q8NGP3 310 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 OR6K6Q8NGW6 343 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 OR4Q3Q8NH05 313 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 OR6X1Q8NH79 312 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 ACTL9Q8TC94 416 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 FBXO25Q8TCJ0 367 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 HPSE2Q8WWQ2 592 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 IFT81Q8WYA0 676 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 C22orf15Q8WYQ4 148 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 AP3S1Q92572 193 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 HGDQ93099 445 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 NXPE2Q96DL1 559 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 CAPNS2Q96L46 248 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 CCDC42Q96M95 316 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 KCNA7Q96RP8 456 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 IL12RB2Q99665 862 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 CGREF1Q99674 301 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 COPS4Q9BT78 406 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 MRPS26Q9BYN8 205 aaKnown RBP3.2□□□□□ -1.9
SF3B1-205ENST00000424674 KRTAP1-5Q9BYS1 174 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 MMP28Q9H239 520 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 SPANXB1Q9NS25 103 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-205ENST00000424674 FGFR1OP2Q9NVK5 253 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 SCML2Q9UQR0 700 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 STYXL1Q9Y6J8 313 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 RAB3GAP2Q9H2M9 1393 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 SYNJ2O15056 1496 aa3.2□□□□□ -1.9
SF3B1-205ENST00000424674 UBN2Q6ZU65 1347 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 NCOA3Q9Y6Q9 1424 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 FUOMA2VDF0 154 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 HIDE1A8MVS5 230 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 TCP10L2B9ZVM9 353 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 G3V3Y1 287 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 hCG_2039718K7EN88 272 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 SOCS2O14508 198 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 TM9SF1O15321 606 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 ITM2AO43736 263 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 KHDRBS3O75525 346 aaKnown RBP3.19□□□□□ -1.9
SF3B1-205ENST00000424674 UTS2O95399 124 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 NTN1O95631 604 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 CD160O95971 181 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 ORM1P02763 201 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 TFAP2AP05549 437 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 GNAO1P09471 354 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 FAM106CPP0CH98 169 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 RNH1P13489 461 aaKnown RBP3.19□□□□□ -1.9
SF3B1-205ENST00000424674 CBR1P16152 277 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 ABOP16442 354 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 GM2AP17900 193 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 XRCC1P18887 633 aaPredicted RBP3.19□□□□□ -1.9
SF3B1-205ENST00000424674 COILP38432 576 aaPredicted RBP3.19□□□□□ -1.9
SF3B1-205ENST00000424674 HLCSP50747 726 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 DNA2P51530 1060 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 RAG2P55895 527 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 DLX5P56178 289 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 UBE2MP61081 183 aaKnown RBP3.19□□□□□ -1.9
SF3B1-205ENST00000424674 TPBGQ13641 420 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 FHL1Q13642 323 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 VGLL4Q14135 290 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 EIF2B1Q14232 305 aaKnown RBP3.19□□□□□ -1.9
SF3B1-205ENST00000424674 RBM39Q14498 530 aaKnown RBP3.19□□□□□ -1.9
SF3B1-205ENST00000424674 SPA17Q15506 151 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 GABRA6Q16445 453 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 ISXQ2M1V0 245 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 RFX4Q33E94 735 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 MIDNQ504T8 468 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 RFTN2Q52LD8 501 aaPredicted RBP3.19□□□□□ -1.9
SF3B1-205ENST00000424674 PDZD11Q5EBL8 140 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 GCSAMLQ5JQS6 135 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 SOHLH1Q5JUK2 328 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 METTL21CQ5VZV1 264 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 OR4C11Q6IEV9 310 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 ANKRD26P1Q6NSI1 321 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 TRNP1Q6NT89 227 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 C3orf33Q6P1S2 294 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 CCNI2Q6ZMN8 369 aaPredicted RBP3.19□□□□□ -1.9
SF3B1-205ENST00000424674 C3P1Q6ZMU1 363 aa3.19□□□□□ -1.9
SF3B1-205ENST00000424674 ZNF730Q6ZMV8 503 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms