RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 CDCP1Q9H5V8 836 aa13.89□□□□□ -0.19
C9orf3-204ENST00000424143 FGF22Q9HCT0 170 aa13.89□□□□□ -0.19
C9orf3-204ENST00000424143 UPB1Q9UBR1 384 aa13.89□□□□□ -0.19
C9orf3-204ENST00000424143 TMEM14AQ9Y6G1 99 aa13.89□□□□□ -0.19
C9orf3-204ENST00000424143 SCN3AQ9NY46 2000 aa13.88□□□□□ -0.19
C9orf3-204ENST00000424143 SLC22A23A1A5C7 686 aa13.88□□□□□ -0.19
C9orf3-204ENST00000424143 FOXS1O43638 330 aa13.88□□□□□ -0.19
C9orf3-204ENST00000424143 APODP05090 189 aa13.88□□□□□ -0.19
C9orf3-204ENST00000424143 AGTR1P30556 359 aa13.88□□□□□ -0.19
C9orf3-204ENST00000424143 SNRPNP63162 240 aaKnown RBP13.88□□□□□ -0.19
C9orf3-204ENST00000424143 LTBQ06643 244 aa13.88□□□□□ -0.19
C9orf3-204ENST00000424143 RASGEF1BQ0VAM2 473 aa13.88□□□□□ -0.19
C9orf3-204ENST00000424143 RUNX3Q13761 415 aa13.88□□□□□ -0.19
C9orf3-204ENST00000424143 EXOSC7Q15024 291 aaKnown RBP13.88□□□□□ -0.19
C9orf3-204ENST00000424143 TCEA2Q15560 299 aa13.88□□□□□ -0.19
C9orf3-204ENST00000424143 FAM122BQ7Z309 247 aa13.88□□□□□ -0.19
C9orf3-204ENST00000424143 OR52R1Q8NGF1 315 aa13.88□□□□□ -0.19
C9orf3-204ENST00000424143 BAHD1Q8TBE0 780 aaPredicted RBP13.88□□□□□ -0.19
C9orf3-204ENST00000424143 CCDC107Q8WV48 283 aa13.88□□□□□ -0.19
C9orf3-204ENST00000424143 ZNRF4Q8WWF5 429 aa13.88□□□□□ -0.19
C9orf3-204ENST00000424143 HERVK_113Q902F9 699 aa13.88□□□□□ -0.19
C9orf3-204ENST00000424143 MCHR2Q969V1 340 aa13.88□□□□□ -0.19
C9orf3-204ENST00000424143 SLC25A18Q9H1K4 315 aa13.88□□□□□ -0.19
C9orf3-204ENST00000424143 SLCO5A1Q9H2Y9 848 aa13.88□□□□□ -0.19
C9orf3-204ENST00000424143 MRM2Q9UI43 246 aaKnown RBP13.88□□□□□ -0.19
C9orf3-204ENST00000424143 A0A0D9SG52 128 aa13.87□□□□□ -0.19
C9orf3-204ENST00000424143 GGT3PA6NGU5 568 aa13.87□□□□□ -0.19
C9orf3-204ENST00000424143 RFPL4AA6NLU0 287 aa13.87□□□□□ -0.19
C9orf3-204ENST00000424143 RFPL4AL1F8VTS6 287 aa13.87□□□□□ -0.19
C9orf3-204ENST00000424143 H3BUI4 141 aa13.87□□□□□ -0.19
C9orf3-204ENST00000424143 PMS2P2O95744 297 aa13.87□□□□□ -0.19
C9orf3-204ENST00000424143 HPP00738 406 aa13.87□□□□□ -0.19
C9orf3-204ENST00000424143 LPLP06858 475 aa13.87□□□□□ -0.19
C9orf3-204ENST00000424143 UBBP0CG47 229 aa13.87□□□□□ -0.19
C9orf3-204ENST00000424143 UBCP0CG48 685 aaKnown RBP13.87□□□□□ -0.19
C9orf3-204ENST00000424143 ACRP10323 421 aa13.87□□□□□ -0.19
C9orf3-204ENST00000424143 ATF4P18848 351 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-204ENST00000424143 ITPKBP27987 946 aa13.87□□□□□ -0.19
C9orf3-204ENST00000424143 MPGP29372 298 aa13.87□□□□□ -0.19
C9orf3-204ENST00000424143 RPS27AP62979 156 aaKnown RBP13.87□□□□□ -0.19
C9orf3-204ENST00000424143 UBA52P62987 128 aaKnown RBP13.87□□□□□ -0.19
C9orf3-204ENST00000424143 IGLV3-21P80748 117 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-204ENST00000424143 EIF2B5Q13144 721 aaKnown RBP13.87□□□□□ -0.19
C9orf3-204ENST00000424143 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.87□□□□□ -0.19
C9orf3-204ENST00000424143 LIPNQ5VXI9 398 aa13.87□□□□□ -0.19
C9orf3-204ENST00000424143 LPCAT3Q6P1A2 487 aa13.87□□□□□ -0.19
C9orf3-204ENST00000424143 MCATQ8IVS2 390 aaKnown RBP13.87□□□□□ -0.19
C9orf3-204ENST00000424143 TMEM52Q8NDY8 209 aa13.87□□□□□ -0.19
C9orf3-204ENST00000424143 TRIM43Q96BQ3 446 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-204ENST00000424143 SLC25A21Q9BQT8 299 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-204ENST00000424143 SCPEP1Q9HB40 452 aa13.87□□□□□ -0.19
C9orf3-204ENST00000424143 TICRRQ7Z2Z1 1910 aa13.87□□□□□ -0.19
C9orf3-204ENST00000424143 A0A0A6YYH2 397 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 SERINC4A6NH21 518 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 A6NJ64 397 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 MPTX1A8MV57 137 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 SRPX2O60687 465 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-204ENST00000424143 IGKV1D-16P01601 117 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 CD8AP01732 235 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 ITGB2P05107 769 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 MGMTP16455 207 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 TNFRSF4P43489 277 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 CENPAP49450 140 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 ID2Q02363 134 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 FGL1Q08830 312 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 CCINQ13939 588 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 NFATC4Q14934 902 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 ZNF660Q6AZW8 331 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-204ENST00000424143 TSSK4Q6SA08 328 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 DGLUCYQ7Z3D6 616 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 SERPINA12Q8IW75 414 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 OR5T2Q8NGG2 359 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 OR4C16Q8NGL9 310 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 OR1S1Q8NH92 325 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 C3orf49Q96BT1 292 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 ADAD1Q96M93 576 aaKnown RBP13.86□□□□□ -0.19
C9orf3-204ENST00000424143 GINS4Q9BRT9 223 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 COMMD4Q9H0A8 199 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 APMAPQ9HDC9 416 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 TMEM74BQ9NUR3 256 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 FRRS1LQ9P0K9 344 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 ADAM18Q9Y3Q7 739 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 DOCK9Q9BZ29 2069 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 ANXA2P2A6NMY6 339 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 PRR32B1ATL7 298 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 NDUFA2O43678 99 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 ANXA2P07355 339 aaKnown RBP13.86□□□□□ -0.19
C9orf3-204ENST00000424143 FCARP24071 287 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 SDHAP31040 664 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 GALNSP34059 522 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 CDKN2AP42771 156 aaKnown RBP13.86□□□□□ -0.19
C9orf3-204ENST00000424143 GRK6P43250 576 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 TPMTP51580 245 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 H2BFSP57053 126 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 ACTBP60709 375 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 ACTG1P63261 375 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 ZNF345Q14585 488 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 PRRT3Q5FWE3 981 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 CLVS2Q5SYC1 327 aa13.86□□□□□ -0.19
C9orf3-204ENST00000424143 FAM166AQ6J272 317 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms