RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 PRSS44E7EML9 344 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 C19orf84I3L1E1 186 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 CLOCKO15516 846 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 PTP4A3O75365 173 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 CCNB2O95067 398 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 IGHV3-9P01782 118 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 F13BP05160 661 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 UQCRC1P31930 480 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 IFNGR2P38484 337 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 OR3A2P47893 321 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 SELENOPP49908 381 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 ASCL1P50553 236 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 POU3F1Q03052 451 aaPredicted RBP8.21□□□□□ -1.1
PDGFC-202ENST00000422544 RPL18Q07020 188 aaKnown RBP8.21□□□□□ -1.1
PDGFC-202ENST00000422544 FAM27E3Q08E93 113 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 FHL1Q13642 323 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 MICAQ29983 383 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 NIPAL3Q6P499 406 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 CASP12Q6UXS9 341 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 TFAP2EQ6VUC0 442 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 NHLRC1Q6VVB1 395 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 PXKQ7Z7A4 578 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 TMEM179BQ7Z7N9 219 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 STK32CQ86UX6 486 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 OR9Q2Q8NGE9 314 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 PYDC1Q8WXC3 89 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 RNASE6Q93091 150 aaKnown RBP8.21□□□□□ -1.1
PDGFC-202ENST00000422544 TMEM45BQ96B21 275 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 APH1AQ96BI3 265 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 DUS3LQ96G46 650 aaKnown RBP8.21□□□□□ -1.1
PDGFC-202ENST00000422544 EMC6Q9BV81 110 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 KRCC1Q9NPI7 259 aaPredicted RBP8.21□□□□□ -1.1
PDGFC-202ENST00000422544 NPDC1Q9NQX5 325 aaPredicted RBP8.21□□□□□ -1.1
PDGFC-202ENST00000422544 ARMC1Q9NVT9 282 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 PARPBPQ9NWS1 579 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 MED29Q9NX70 200 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 DNAJB9Q9UBS3 223 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 TMEM5Q9Y2B1 443 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 NOX1Q9Y5S8 564 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 KLF2Q9Y5W3 355 aaPredicted RBP8.21□□□□□ -1.1
PDGFC-202ENST00000422544 MPDZO75970 2070 aa8.21□□□□□ -1.1
PDGFC-202ENST00000422544 INTS1Q8N201 2190 aaKnown RBP8.21□□□□□ -1.1
PDGFC-202ENST00000422544 PKDREJQ9NTG1 2253 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 VPS13CQ709C8 3753 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 UNC119BA6NIH7 251 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 ZNF726A6NNF4 738 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 HNRNPRO43390 633 aaKnown RBP8.2□□□□□ -1.1
PDGFC-202ENST00000422544 KLF4O43474 513 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 TRAF3IP2O43734 574 aaPredicted RBP8.2□□□□□ -1.1
PDGFC-202ENST00000422544 ENTPD5O75356 428 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 E2F6O75461 281 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 GASTP01350 101 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 TSPAN19P0C672 248 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 POU2F1P14859 743 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 IFNGR1P15260 489 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 ZNF26P17031 533 aaPredicted RBP8.2□□□□□ -1.1
PDGFC-202ENST00000422544 DNAJA1P31689 397 aaKnown RBP8.2□□□□□ -1.1
PDGFC-202ENST00000422544 SLC9A3P48764 834 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 RPS4XP62701 263 aaKnown RBP8.2□□□□□ -1.1
PDGFC-202ENST00000422544 SNTB1Q13884 538 aaKnown RBP8.2□□□□□ -1.1
PDGFC-202ENST00000422544 FBXL19-AS1Q494R0 122 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 ZBED5Q49AG3 693 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 ALG10Q5BKT4 473 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 DMRTA1Q5VZB9 504 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 CARD17Q5XLA6 110 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 ZNF770Q6IQ21 691 aaPredicted RBP8.2□□□□□ -1.1
PDGFC-202ENST00000422544 C1orf94Q6P1W5 598 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 PGBD2Q6P3X8 592 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 BEND4Q6ZU67 534 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 AMIGO2Q86SJ2 522 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 IGFN1Q86VF2 1251 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 WDFY1Q8IWB7 410 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 HS3ST5Q8IZT8 346 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 UBE2J2Q8N2K1 259 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 AQP11Q8NBQ7 271 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 ANKK1Q8NFD2 765 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 OR10G2Q8NGC3 310 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 GNPDA2Q8TDQ7 276 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 LRTOMTQ8WZ04 291 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 ENKD1Q9H0I2 346 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 NTN4Q9HB63 628 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 MCCC2Q9HCC0 563 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 FANCFQ9NPI8 374 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 INIPQ9NRY2 104 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 SLC7A10Q9NS82 523 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 GALNT8Q9NY28 637 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 HIF3AQ9Y2N7 669 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 ARHGAP21Q5T5U3 1957 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 FBN3Q75N90 2809 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 ALPK2Q86TB3 2170 aa8.2□□□□□ -1.1
PDGFC-202ENST00000422544 A0A1W2PRG6 482 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 SLC35F4A4IF30 521 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 H3BNX3 289 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 DEAF1O75398 565 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-202ENST00000422544 UPK3AO75631 287 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 ZNF432O94892 652 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 BCL10O95999 233 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 ADAP00813 363 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 PRKACGP22612 351 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 FPR3P25089 353 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms