RNA–Protein interactions for RNA: ENST00000416942.2

GTF3AP1-201, Transcript of general transcription factor IIIA pseudogene 1, humanhuman

BASIC

Gene GTF3AP1, Length 1,004 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP1-201ENST00000416942 SPPL2AQ8TCT8 520 aa4.95□□□□□ -1.62
GTF3AP1-201ENST00000416942 LRR1Q96L50 414 aa4.95□□□□□ -1.62
GTF3AP1-201ENST00000416942 SGK494Q96LW2 274 aa4.95□□□□□ -1.62
GTF3AP1-201ENST00000416942 SFXN2Q96NB2 322 aa4.95□□□□□ -1.62
GTF3AP1-201ENST00000416942 ERGIC2Q96RQ1 377 aa4.95□□□□□ -1.62
GTF3AP1-201ENST00000416942 CCT8L2Q96SF2 557 aa4.95□□□□□ -1.62
GTF3AP1-201ENST00000416942 CDRT15Q96T59 188 aa4.95□□□□□ -1.62
GTF3AP1-201ENST00000416942 PINK1Q9BXM7 581 aa4.95□□□□□ -1.62
GTF3AP1-201ENST00000416942 BPESC1Q9GZL8 116 aa4.95□□□□□ -1.62
GTF3AP1-201ENST00000416942 AICDAQ9GZX7 198 aa4.95□□□□□ -1.62
GTF3AP1-201ENST00000416942 SPNS1Q9H2V7 528 aa4.95□□□□□ -1.62
GTF3AP1-201ENST00000416942 CBLN4Q9NTU7 201 aa4.95□□□□□ -1.62
GTF3AP1-201ENST00000416942 FETUBQ9UGM5 382 aa4.95□□□□□ -1.62
GTF3AP1-201ENST00000416942 MRPS33Q9Y291 106 aaKnown RBP4.95□□□□□ -1.62
GTF3AP1-201ENST00000416942 HYOU1Q9Y4L1 999 aa4.95□□□□□ -1.62
GTF3AP1-201ENST00000416942 SPACA6W5XKT8 324 aa4.95□□□□□ -1.62
GTF3AP1-201ENST00000416942 DYNC2H1Q8NCM8 4307 aaKnown RBP4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 NOTCH3Q9UM47 2321 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 A0A1W2PRB8 838 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 TRBC2A0A5B9 178 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 SYCE3A1L190 88 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 URADA6NGE7 173 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 HACD1B0YJ81 288 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 E7EQL1 145 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 ABCD4O14678 606 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 SHOX2O60902 331 aaPredicted RBP4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 CTNSO60931 367 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 AQP8O94778 261 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 CLDN9O95484 217 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 NUDT17P0C025 328 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 SMIM10L1P0DMW3 83 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 PSMA3P25788 255 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 RPL22P35268 128 aaKnown RBP4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 FABP6P51161 128 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 SUCLG1P53597 346 aaKnown RBP4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 CLDN15P56746 228 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 RAB38P57729 211 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 UBA52P62987 128 aaKnown RBP4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 CUL1Q13616 776 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 PON3Q15166 354 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 TRIM40Q6P9F5 258 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 NOTCH2NLQ7Z3S9 236 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 ZNF554Q86TJ5 538 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 LINC00346Q8IVM7 164 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 DND1Q8IYX4 353 aaKnown RBP4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 MUC15Q8N387 334 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 OTUD6BQ8N6M0 293 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 ZDHHC22Q8N966 263 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 PAPD5Q8NDF8 572 aaKnown RBP4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 OR2AJ1Q8NGZ0 328 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 LRRC45Q96CN5 670 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 SMIM10Q96HG1 83 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 SLC6A7Q99884 636 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 WWTR1Q9GZV5 400 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 MMP27Q9H306 513 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 DPAGT1Q9H3H5 408 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 CDC42EP4Q9H3Q1 356 aaKnown RBP4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 METTL7AQ9H8H3 244 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 RNF122Q9H9V4 155 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 LPAR2Q9HBW0 351 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 NGBQ9NPG2 151 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 NSMCE4AQ9NXX6 385 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 PDP1Q9P0J1 537 aaPredicted RBP4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 PCDHGB4Q9UN71 923 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 TMEM5Q9Y2B1 443 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 KCNK7Q9Y2U2 307 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 PPIAL4AQ9Y536 164 aa4.94□□□□□ -1.62
GTF3AP1-201ENST00000416942 LOC100509620A0A075B734 347 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 A0A087X0T9 212 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 NPIPA5A0A0B4J1W7 369 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 IQANK1A0A1B0GTG1 560 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 MACROD2A1Z1Q3 448 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 E9PI62 339 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 NPIPA7E9PJI5 369 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 H7C417 338 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 ERI3O43414 337 aaKnown RBP4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 XRCC3O43542 346 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 ZBTB14O43829 449 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 ICOSLGO75144 302 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 CBR3O75828 277 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 IGKV3-11P04433 115 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 FAM228BP0C875 321 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 NPIPA8P0DM63 369 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 TPSB2P20231 275 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 PSMB1P20618 241 aaKnown RBP4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 IL32P24001 234 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 ATP5DP30049 168 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 GABRA5P31644 462 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 TTPAP49638 278 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 PLA2G16P53816 162 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 CTBP2P56545 445 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 SCGB2A2Q13296 93 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 GUSBP1Q15486 140 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 TPSAB1Q15661 275 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 OR5M10Q6IEU7 315 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 CCBE1Q6UXH8 406 aaPredicted RBP4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 VSIG1Q86XK7 387 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 TBC1D19Q8N5T2 526 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 PRELID2Q8N945 189 aa4.93□□□□□ -1.62
GTF3AP1-201ENST00000416942 STEAP2Q8NFT2 490 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms