RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 TMEM92Q6UXU6 159 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 DPPA2Q7Z7J5 298 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 OR6Q1Q8NGQ2 317 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 HYLS1Q96M11 299 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 SLC6A7Q99884 636 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 C12orf10Q9HB07 376 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 RLFQ13129 1914 aa10.99□□□□□ -0.65
PTPRF-205ENST00000414879 TCRBV5S2A0A599 114 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 ZNF16P17020 682 aaPredicted RBP10.98□□□□□ -0.65
PTPRF-205ENST00000414879 ITGB8P26012 769 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 CD97P48960 835 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 GFERP55789 205 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 KIF18BQ86Y91 864 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 GLB1L2Q8IW92 636 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 SGPP2Q8IWX5 399 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 RPP25Q9BUL9 199 aaKnown RBP10.98□□□□□ -0.65
PTPRF-205ENST00000414879 SERGEFQ9UGK8 458 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 FBXO4Q9UKT5 387 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 PCDHGA5Q9Y5G8 931 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 ARID2Q68CP9 1835 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 F5P12259 2224 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 ZAR1LA6NP61 321 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 SCGB1D2O95969 90 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 ACHEP22303 614 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 CCL7P80098 99 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 PLCXD3Q63HM9 321 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 WDR74Q6RFH5 385 aaPredicted RBP10.98□□□□□ -0.65
PTPRF-205ENST00000414879 TBPL2Q6SJ96 375 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 ARIH2OSQ8N7S6 290 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 SYNPRQ8TBG9 265 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 GCDHQ92947 438 aaPredicted RBP10.98□□□□□ -0.65
PTPRF-205ENST00000414879 AIFM2Q9BRQ8 373 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 CDCA4Q9BXL8 241 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 SEMA4CQ9C0C4 833 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 ZNF350Q9GZX5 532 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 DNAJB11Q9UBS4 358 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 CACNG2Q9Y698 323 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 C4orf47A7E2U8 309 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 STMND1H3BQB6 276 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 NARSO43776 548 aaKnown RBP10.98□□□□□ -0.65
PTPRF-205ENST00000414879 ETHE1O95571 254 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 C1QAP02745 245 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 TBXA2RP21731 343 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 DNASE1L3Q13609 305 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 TBRG1Q3YBR2 411 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 LAIR1Q6GTX8 287 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 PTOV1Q86YD1 416 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 SLC22A24Q8N4F4 322 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 NMNAT3Q96T66 252 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 NIPSNAP1Q9BPW8 284 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 GHRLQ9UBU3 117 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 TMEM72A0PK05 275 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 D6RAR5 112 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 GAPDHSO14556 408 aaPredicted RBP10.98□□□□□ -0.65
PTPRF-205ENST00000414879 GYPBP06028 91 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 COL9A1P20849 921 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 RNF4P78317 190 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 KCNAB1Q14722 419 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 PCGF3Q3KNV8 242 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 UBE2UQ5VVX9 321 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 FAHD1Q6P587 224 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 LINC00696Q6ZRV3 163 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 NAXEQ8NCW5 288 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 RCBTB1Q8NDN9 531 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 OXGR1Q96P68 337 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 OR2B2Q9GZK3 357 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 WWTR1Q9GZV5 400 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 CHST8Q9H2A9 424 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 PTTG3PQ9NZH4 202 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 KCNN3Q9UGI6 736 aa10.98□□□□□ -0.65
PTPRF-205ENST00000414879 ANKUB1A6NFN9 424 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 FZD7O75084 574 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 PNLIPP16233 465 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 DNASE1P24855 282 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 CD34P28906 385 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 PSMB10P40306 273 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 ECI1P42126 302 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 FGFBP1Q14512 234 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 SLC10A1Q14973 349 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 ZNF425Q6IV72 752 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 ZNF813Q6ZN06 617 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 PM20D2Q8IYS1 436 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 SPAG16Q8N0X2 631 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 BEST3Q8N1M1 668 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 DTWD2Q8NBA8 298 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 OR52I1Q8NGK6 324 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 OR2A5Q96R48 311 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 LMF1Q96S06 567 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 TMEM43Q9BTV4 400 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 RLIMQ9NVW2 624 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 GSKIPQ9P0R6 139 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 MKRN2OSH3BPM6 223 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 GABARAPO95166 117 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 EIF2S3P41091 472 aaKnown RBP10.97□□□□□ -0.65
PTPRF-205ENST00000414879 KIAA0040Q15053 153 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 ZIC1Q15915 447 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 VWA2Q5GFL6 755 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 ZMAT1Q5H9K5 638 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 CLVS2Q5SYC1 327 aa10.97□□□□□ -0.65
PTPRF-205ENST00000414879 FAM109BQ6ICB4 259 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms