RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 PRPS1P60891 318 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 ARF1P84077 181 aaKnown RBP16.49■□□□□ 0.23
TRIM56-202ENST00000412507 SPOCK1Q08629 439 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 PHYHD1Q5SRE7 291 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 KLHL24Q6TFL4 600 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 SLC46A3Q7Z3Q1 461 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 PIAS4Q8N2W9 510 aaPredicted RBP16.49■□□□□ 0.23
TRIM56-202ENST00000412507 WFDC11Q8NEX6 87 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 TMEM171Q8WVE6 324 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 TMEM239Q8WW34 195 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 BCL2L2Q92843 193 aaPredicted RBP16.49■□□□□ 0.23
TRIM56-202ENST00000412507 FAM162AQ96A26 154 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 BOD1Q96IK1 185 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 LRRC37BQ96QE4 947 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 SPAG4Q9NPE6 437 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 ARL8BQ9NVJ2 186 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 TAS2R5Q9NYW4 299 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 ADA2Q9NZK5 511 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 ZNF229Q9UJW7 825 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 A4GNTQ9UNA3 340 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 LAMP3Q9UQV4 416 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 SNX13Q9Y5W8 968 aa16.49■□□□□ 0.23
TRIM56-202ENST00000412507 A0A096LPE4 126 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 A0A1W2PPZ6 126 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 M0R3G1 203 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 DCTN3O75935 186 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 HIST1H2ABP04908 130 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 ASAH2BP0C7U1 165 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 THRBP10828 461 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 PTAFRP25105 342 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 RBM34P42696 430 aaKnown RBP16.48■□□□□ 0.23
TRIM56-202ENST00000412507 ZP4Q12836 540 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 CAMK2DQ13557 499 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 CEACAM16Q2WEN9 425 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 HIST3H2AQ7L7L0 130 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 NANOGNBQ7Z5D8 188 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 KRTAP1-3Q8IUG1 177 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 C20orf196Q8IYI0 205 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 RNF148Q8N7C7 305 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 HIST1H2ACQ93077 130 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 ZNF837Q96EG3 531 aaPredicted RBP16.48■□□□□ 0.23
TRIM56-202ENST00000412507 PERPQ96FX8 193 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 HSH2DQ96JZ2 352 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 PRRC1Q96M27 445 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 NELFAQ9H3P2 528 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 CRLF2Q9HC73 371 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 C20orf141Q9NUB4 165 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 CISD1Q9NZ45 108 aaKnown RBP16.48■□□□□ 0.23
TRIM56-202ENST00000412507 EGFL7Q9UHF1 273 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 MGAT4BQ9UQ53 548 aa16.48■□□□□ 0.23
TRIM56-202ENST00000412507 MAGED1Q9Y5V3 778 aaPredicted RBP16.48■□□□□ 0.23
TRIM56-202ENST00000412507 ARFGEF3Q5TH69 2177 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 ZNF726A6NNF4 738 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 J3KTA2 159 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 RNF13O43567 381 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 IFNW1P05000 195 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 IFNGR1P15260 489 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 FUT4P22083 530 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 CDH11P55287 796 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 SH3BGRP55822 239 aaPredicted RBP16.47■□□□□ 0.23
TRIM56-202ENST00000412507 BIDP55957 195 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 TUBA1BP68363 451 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 TUBA4AP68366 448 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 ST3GAL3Q11203 375 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 IFI44LQ53G44 452 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 ANKRD16Q6P6B7 361 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 SLC22A25Q6T423 547 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 TUBA1AQ71U36 451 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 FKBP9P1Q75LS8 142 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 SLC35D2Q76EJ3 337 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 LRRC75A-AS1Q8N1F1 130 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 ANKK1Q8NFD2 765 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 SMAP2Q8WU79 429 aaPredicted RBP16.47■□□□□ 0.23
TRIM56-202ENST00000412507 GEMIN6Q8WXD5 167 aaKnown RBP16.47■□□□□ 0.23
TRIM56-202ENST00000412507 SGTBQ96EQ0 304 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 HS6ST2Q96MM7 605 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 CCT8L2Q96SF2 557 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 TMUB1Q9BVT8 246 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 RHCGQ9UBD6 479 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 TAGLN3Q9UI15 199 aa16.47■□□□□ 0.23
TRIM56-202ENST00000412507 BLOC1S5-TXNDC5H3BN57 136 aa16.46■□□□□ 0.23
TRIM56-202ENST00000412507 PIP5K1CO60331 668 aa16.46■□□□□ 0.23
TRIM56-202ENST00000412507 OR7A10O76100 309 aa16.46■□□□□ 0.23
TRIM56-202ENST00000412507 SOD3P08294 240 aa16.46■□□□□ 0.23
TRIM56-202ENST00000412507 DANCRP0C864 163 aa16.46■□□□□ 0.23
TRIM56-202ENST00000412507 CD99P14209 185 aa16.46■□□□□ 0.23
TRIM56-202ENST00000412507 FUT1P19526 365 aa16.46■□□□□ 0.23
TRIM56-202ENST00000412507 IFNA8P32881 189 aa16.46■□□□□ 0.23
TRIM56-202ENST00000412507 PTH2RP49190 550 aa16.46■□□□□ 0.23
TRIM56-202ENST00000412507 UBE2NP61088 152 aaKnown RBP16.46■□□□□ 0.23
TRIM56-202ENST00000412507 C1QTNF12Q5T7M4 302 aa16.46■□□□□ 0.23
TRIM56-202ENST00000412507 GLYATQ6IB77 296 aa16.46■□□□□ 0.23
TRIM56-202ENST00000412507 FAM156AQ8NDB6 213 aa16.46■□□□□ 0.23
TRIM56-202ENST00000412507 RBM15BQ8NDT2 890 aaKnown RBP16.46■□□□□ 0.23
TRIM56-202ENST00000412507 OR6N1Q8NGY5 312 aa16.46■□□□□ 0.23
TRIM56-202ENST00000412507 RADILQ96JH8 1075 aa16.46■□□□□ 0.23
TRIM56-202ENST00000412507 LRR1Q96L50 414 aa16.46■□□□□ 0.23
TRIM56-202ENST00000412507 OBP2BQ9NPH6 170 aa16.46■□□□□ 0.23
TRIM56-202ENST00000412507 MED31Q9Y3C7 131 aa16.46■□□□□ 0.23
TRIM56-202ENST00000412507 ARPC4-TTLL3A0A0A6YYG9 625 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms