RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 SMIM28A0A1B0GU29 152 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 A0A1W2PQ72 361 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 RAB19A4D1S5 217 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 ZNF487B1APH4 448 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 GOSR2O14653 212 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 EIF3HO15372 352 aaKnown RBP eCLIP3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 GPX5O75715 221 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 TSPAN13O95857 204 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 IFNW1P05000 195 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 TPM3P06753 285 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 GFAPP14136 432 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 ZNF26P17031 533 aaPredicted RBP3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 TCN1P20061 433 aaPredicted RBP3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 BGNP21810 368 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 SLC2A5P22732 501 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 ADORA2BP29275 332 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 PCK1P35558 622 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 PRELPP51888 382 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 DLX5P56178 289 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 RPS14P62263 151 aaKnown RBP3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 LCN2P80188 198 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 RPL36AP83881 106 aaKnown RBP3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 XIAPP98170 497 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 ZNF33AQ06730 810 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 CALCOCO2Q13137 446 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 COTL1Q14019 142 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 GPR176Q14439 515 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 SIX1Q15475 284 aaPredicted RBP3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 ZNF506Q5JVG8 444 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 PPM1LQ5SGD2 360 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 LY6G6FQ5SQ64 297 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 MARCH8Q5T0T0 291 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 STPG1Q5TH74 334 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 GPR107Q5VW38 600 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 C19orf35Q6ZS72 473 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 Q6ZSR3 168 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 GPRIN3Q6ZVF9 776 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 COPS6Q7L5N1 327 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 ARCQ7LC44 396 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 PID1Q7Z2X4 250 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 MCOLN2Q8IZK6 566 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 SNX31Q8N9S9 440 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 CSNK1G2-AS1Q8NCQ2 148 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 OR2G2Q8NGZ5 317 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 CCDC12Q8WUD4 166 aaPredicted RBP3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 DNAJC1Q96KC8 554 aaKnown RBP3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 CYTH2Q99418 400 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 LZTS2Q9BRK4 669 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 TM2D1Q9BX74 207 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 TMEM59Q9BXS4 323 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 FGFBP2Q9BYJ0 223 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 ACTR3CQ9C0K3 210 aaPredicted RBP3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 SLC7A5P2Q9GIP4 190 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 ISG20L2Q9H9L3 353 aaKnown RBP3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 FGF20Q9NP95 211 aaPredicted RBP3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 DDX19BQ9UMR2 479 aa3.05□□□□□ -1.92
RNU4-78P-201ENST00000410940 USP42Q9H9J4 1324 aaKnown RBP3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 ZNF99A8MXY4 864 aaPredicted RBP3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 E9PQ18 207 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 GFYI3L273 518 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 HCRTR1O43613 425 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 ZFAND5O76080 213 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 VAPBO95292 243 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 CLDN1O95832 211 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 TACSTD2P09758 323 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 PATE4P0C8F1 98 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 PMCHP20382 165 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 AK4P27144 223 aaPredicted RBP3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 NTSP30990 170 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 GCKP35557 465 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 SLC1A2P43004 574 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 LINC01547P58512 204 aaPredicted RBP3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 NANOS2P60321 138 aaKnown RBP3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 TRAM2Q15035 370 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 KLF17Q5JT82 389 aaPredicted RBP3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 C9orf66Q5T8R8 295 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 ADNP2Q6IQ32 1131 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 FAAP20Q6NZ36 180 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 ZNF836Q6ZNA1 936 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 OR2W3Q7Z3T1 314 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 EID2Q8N6I1 236 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 SUMF1Q8NBK3 374 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 OR1S2Q8NGQ3 325 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 OR56B4Q8NH76 319 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 ITFG1Q8TB96 612 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 SSC4DQ8WTU2 575 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 MYDGFQ969H8 173 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 FGGYQ96C11 551 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 ZNF396Q96N95 335 aaPredicted RBP3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 CATSPER2Q96P56 530 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 SH3GL3Q99963 347 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 MRPL45Q9BRJ2 306 aaKnown RBP3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 MCRIP2Q9BUT9 160 aaKnown RBP3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 UCK2Q9BZX2 261 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 UPF3AQ9H1J1 476 aaKnown RBP3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 KIR3DX1Q9H7L2 352 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 PANK3Q9H999 370 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 SIAEQ9HAT2 523 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 ZNF446Q9NWS9 450 aa3.04□□□□□ -1.92
RNU4-78P-201ENST00000410940 KCNIP1Q9NZI2 227 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms