RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 HEYLQ9NQ87 328 aaPredicted RBP10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 HCFC2Q9Y5Z7 792 aa10.43□□□□□ -0.74
PRPF40A-202ENST00000410080 TNFSF11O14788 317 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 PEA15Q15121 130 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 TMEM244Q5VVB8 128 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 METTL11BQ5VVY1 283 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 THNSL2Q86YJ6 484 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 CNTN4Q8IWV2 1026 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 CISD2Q8N5K1 135 aaKnown RBP10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 C11orf40Q8WZ69 217 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 RANBP9Q96S59 729 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 NIPAL2Q9H841 368 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 DCAF16Q9NXF7 216 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 SEC16AO15027 2179 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 NRG2O14511 850 aaPredicted RBP10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 PHF1O43189 567 aaPredicted RBP10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 SNRNP70P08621 437 aaKnown RBP10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 SUB1P53999 127 aaKnown RBP eCLIP10.42□□□□□ -0.745e-19■■■■□ 20.3
PRPF40A-202ENST00000410080 ANKRD16Q6P6B7 361 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 THSD1Q9NS62 852 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 C1orf123Q9NWV4 160 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 PURGQ9UJV8 347 aaKnown RBP10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 ATAD5Q96QE3 1844 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 E7ESA3 106 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 GALR3O60755 368 aaPredicted RBP10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 RGS11O94810 467 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 IL2RAP01589 272 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 FAM157BP0CG42 384 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 MFGE8Q08431 387 aaPredicted RBP10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 CRMP1Q14194 572 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 OR4K5Q8NGD3 323 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 OR5M9Q8NGP3 310 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 SOX18P35713 384 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 RPL13AP40429 203 aaKnown RBP10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 UMODL1-AS1Q8N2C9 162 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 TCEAL2Q9H3H9 227 aaPredicted RBP10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 MRPL22Q9NWU5 206 aaKnown RBP10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 PAQR5Q9NXK6 330 aaPredicted RBP10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 PTTG3PQ9NZH4 202 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 BRWD1Q9NSI6 2320 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 ADH4P08319 380 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 FOLR1P15328 257 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 RAB35Q15286 201 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 RGNQ15493 299 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 PGAP1Q75T13 922 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 BAGE3Q86Y29 109 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 BAGE2Q86Y30 109 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 PRR7Q8TB68 274 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 ANKRD19PQ9H560 264 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 CLCF1Q9UBD9 225 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 V9GY05 133 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 RGPD4Q7Z3J3 1758 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 BHLHE40O14503 412 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 FOXD2O60548 495 aaPredicted RBP10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 SORBS2O94875 1100 aaKnown RBP10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 CXADRP78310 365 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 SH3BP2P78314 561 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 EXOSC2Q13868 293 aaKnown RBP10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 YIF1BQ5BJH7 314 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 SLC6A19Q695T7 634 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 LPCAT3Q6P1A2 487 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 PARS2Q7L3T8 475 aaKnown RBP10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 MS4A15Q8N5U1 240 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 SIMC1Q8NDZ2 872 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 OR1M1Q8NGA1 313 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 ZNF587Q96SQ5 575 aaPredicted RBP10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 CCDC106Q9BWC9 280 aa10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 DDX31Q9H8H2 851 aaKnown RBP10.42□□□□□ -0.74
PRPF40A-202ENST00000410080 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.42□□□□□ -0.749e-6■□□□□ 9.4
PRPF40A-202ENST00000410080 TSTD3H0UI37 97 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 FDXRP22570 491 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 ZNF595Q8IYB9 648 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 TDHQ8IZJ6 230 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 ENDOVQ8N8Q3 282 aaKnown RBP10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 OR1S2Q8NGQ3 325 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 LGALS12Q96DT0 336 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 MBOAT4Q96T53 435 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 GALNT9Q9HCQ5 603 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 ACOT13Q9NPJ3 140 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 MKS1Q9NXB0 559 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 NPTNQ9Y639 398 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 GTF3C1Q12789 2109 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 ZNF814B7Z6K7 855 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 CALCBP10092 127 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 CPMP14384 443 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 GJA4P35212 333 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 RFC3P40938 356 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 NKX2-5P52952 324 aaPredicted RBP10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 WNT4P56705 351 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 EXT1Q16394 746 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 FAM213BQ8TBF2 198 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 RAB3CQ96E17 227 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 TAS2R16Q9NYV7 291 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 ENPP5Q9UJA9 477 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 FAM90A27PA6NNH2 459 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 NUDT7P0C024 238 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 PCGF2P35227 344 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 GPR19Q15760 415 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 DPPA4Q7L190 304 aa10.41□□□□□ -0.74
PRPF40A-202ENST00000410080 OR6T1Q8NGN1 323 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms