RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 TMEM40Q8WWA1 233 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 PEX11GQ96HA9 241 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 KLHL13Q9P2N7 655 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 ASB1Q9Y576 335 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 NALCNQ8IZF0 1738 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 LOC100289279A0A1B0GTE1 492 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 KDM4EB2RXH2 506 aaPredicted RBP9.07□□□□□ -0.96
HERC3-202ENST00000402738 ZNF354AO60765 605 aaPredicted RBP9.07□□□□□ -0.96
HERC3-202ENST00000402738 TNFP01375 233 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 APOA2P02652 100 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 TEAD1P28347 426 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 C19orf57Q0VDD7 668 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 CAMK2DQ13557 499 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 RBMS3Q6XE24 437 aaKnown RBP9.07□□□□□ -0.96
HERC3-202ENST00000402738 ZNF511Q8NB15 262 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 LFNGQ8NES3 379 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 OR9K2Q8NGE7 335 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 BORCS7Q96B45 105 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 C1QTNF6Q9BXI9 259 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 A4GALTQ9NPC4 353 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 A0A087WV62 115 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 PSMB6P28072 239 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 HLXQ14774 488 aaPredicted RBP9.07□□□□□ -0.96
HERC3-202ENST00000402738 GDF7Q7Z4P5 450 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 UBAC2Q8NBM4 344 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 OR2G3Q8NGZ4 309 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 CA5BP1Q8WTZ4 195 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 MRPL38Q96DV4 380 aaKnown RBP9.07□□□□□ -0.96
HERC3-202ENST00000402738 AKR1E2Q96JD6 320 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 OR1F2PQ96R84 312 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 SGIP1Q9BQI5 828 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 TMPRSS5Q9H3S3 457 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 ASIC5Q9NY37 505 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 TCRBV16S1A1N1A0A5B0 115 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 DRGXA6NNA5 263 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 H3BQ06 376 aaPredicted RBP9.07□□□□□ -0.96
HERC3-202ENST00000402738 DSCR3O14972 297 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 BCL2L11O43521 198 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 LILRB3O75022 631 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 LDB3O75112 727 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 PCMT1P22061 227 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 SNRPNP63162 240 aaKnown RBP9.07□□□□□ -0.96
HERC3-202ENST00000402738 ALKBH1Q13686 389 aaKnown RBP9.07□□□□□ -0.96
HERC3-202ENST00000402738 ST3GAL2Q16842 350 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 MARCH8Q5T0T0 291 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 HSD11B1LQ7Z5J1 315 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 RNF113BQ8IZP6 322 aaKnown RBP9.07□□□□□ -0.96
HERC3-202ENST00000402738 RCBTB1Q8NDN9 531 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 OR6S1Q8NH40 331 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 NEURL3Q96EH8 262 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 CXorf58Q96LI9 332 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 RTP3Q9BQQ7 232 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 RHOFQ9HBH0 211 aa9.07□□□□□ -0.96
HERC3-202ENST00000402738 BTBD17A6NE02 478 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 TRAPPC6AO75865 159 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 SLC2A10O95528 541 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 FABP4P15090 132 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 PSMB5P28074 263 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 CLDN2P57739 230 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 BDH1Q02338 343 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 SSX7Q7RTT5 188 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 CPEB2Q7Z5Q1 589 aaKnown RBP9.06□□□□□ -0.96
HERC3-202ENST00000402738 NECAP1Q8NC96 275 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 MITD1Q8WV92 249 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 PHYHIPQ92561 330 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 DPF3Q92784 378 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 OPA3Q9H6K4 179 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 DLL4Q9NR61 685 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 TAS2R5Q9NYW4 299 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 MEIKINA0A087WXM9 373 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 YY2O15391 372 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 SELENOFO60613 162 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 SFTA3P0C7M3 94 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 RRASP10301 218 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 MGST1P10620 155 aaKnown RBP9.06□□□□□ -0.96
HERC3-202ENST00000402738 BMPR1AP36894 532 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 FABP6P51161 128 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 TPBGQ13641 420 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 ZNF266Q14584 549 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 DBX2Q6ZNG2 339 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 SKA3Q8IX90 412 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 TMEM156Q8N614 296 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 SUMF1Q8NBK3 374 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 FOXJ1Q92949 421 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 SCMH1Q96GD3 660 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 USB1Q9BQ65 265 aaKnown RBP9.06□□□□□ -0.96
HERC3-202ENST00000402738 ZNF251Q9BRH9 671 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 TMEM59Q9BXS4 323 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 ZNF160Q9HCG1 818 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 HINT3Q9NQE9 182 aaKnown RBP9.06□□□□□ -0.96
HERC3-202ENST00000402738 SLC39A9Q9NUM3 307 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 KLHL42Q9P2K6 505 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 NCDNQ9UBB6 729 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 IFT172Q9UG01 1749 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 DKKL1Q9UK85 242 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 GPR55Q9Y2T6 319 aaPredicted RBP9.06□□□□□ -0.96
HERC3-202ENST00000402738 TIAM2Q8IVF5 1701 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 A0A1B0GTL3 188 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 IGLON5A6NGN9 336 aa9.06□□□□□ -0.96
HERC3-202ENST00000402738 VSTM2BA6NLU5 285 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms