RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 TMEM201Q5SNT2 666 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 SVOPLQ8N434 492 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 ATG16L2Q8NAA4 619 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 SDCCAG3Q96C92 435 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 PLA2G12AQ9BZM1 189 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 OR52D1Q9H346 318 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 C12orf49Q9H741 205 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 PLSCR4Q9NRQ2 329 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 NOSIPQ9Y314 301 aaKnown RBP14.14□□□□□ -0.15
HMGA1-204ENST00000401473 NOX1Q9Y5S8 564 aa14.14□□□□□ -0.15
HMGA1-204ENST00000401473 ICE1Q9Y2F5 2266 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 DOPEY2Q9Y3R5 2298 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 GPR171O14626 319 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 ZNF432O94892 652 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 COX10Q12887 443 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 C1DQ13901 141 aaKnown RBP14.13□□□□□ -0.15
HMGA1-204ENST00000401473 RFX4Q33E94 735 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 ANKDD1AQ495B1 522 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 EEF1A1P5Q5VTE0 462 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 SMARCD3Q6STE5 483 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 ZNF620Q6ZNG0 422 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 RASSF6Q6ZTQ3 369 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 GALNT5Q7Z7M9 940 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 UEVLDQ8IX04 471 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 FAM26EQ8N5C1 309 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 ANKK1Q8NFD2 765 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 SLC29A1Q99808 456 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 UCK2Q9BZX2 261 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 INIPQ9NRY2 104 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 STX18Q9P2W9 335 aaKnown RBP14.13□□□□□ -0.15
HMGA1-204ENST00000401473 TMEFF2Q9UIK5 374 aaPredicted RBP14.13□□□□□ -0.15
HMGA1-204ENST00000401473 RRP15Q9Y3B9 282 aaKnown RBP14.13□□□□□ -0.15
HMGA1-204ENST00000401473 ADAM18Q9Y3Q7 739 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 DCHS2Q6V1P9 2916 aa14.13□□□□□ -0.15
HMGA1-204ENST00000401473 MGRN1O60291 552 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 SOX14O95416 240 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 SELENOPP49908 381 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 CLDN17P56750 224 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 CTXN1P60606 82 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 PPP2R2BQ00005 443 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 ACKR1Q16570 336 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 KDM4DQ6B0I6 523 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 SLC35D2Q76EJ3 337 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 RELL2Q8NC24 303 aaPredicted RBP14.12□□□□□ -0.15
HMGA1-204ENST00000401473 OR8D4Q8NGM9 314 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 ITLN2Q8WWU7 325 aaPredicted RBP14.12□□□□□ -0.15
HMGA1-204ENST00000401473 SAMD8Q96LT4 415 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 SFXN3Q9BWM7 321 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 OSBPL10Q9BXB5 764 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 GABARAPL1Q9H0R8 117 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 NRIP3Q9NQ35 241 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 EMC3Q9P0I2 261 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 ZNF346Q9UL40 294 aaKnown RBP14.12□□□□□ -0.15
HMGA1-204ENST00000401473 EMC9Q9Y3B6 208 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 PTPN13Q12923 2485 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 SLC35F4A4IF30 521 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 SOCS2O14508 198 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 MITFO75030 526 aaPredicted RBP14.12□□□□□ -0.15
HMGA1-204ENST00000401473 MRPL33O75394 65 aaKnown RBP14.12□□□□□ -0.15
HMGA1-204ENST00000401473 NDUFB2O95178 105 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 IL18BPO95998 194 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 OPRM1P35372 400 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 RUNX1T1Q06455 604 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 MELKQ14680 651 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 MTFR2Q6P444 385 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 FAM122BQ7Z309 247 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 MRGPRGQ86SM5 289 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 ZNF610Q8N9Z0 462 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 KATNB1Q9BVA0 655 aa14.12□□□□□ -0.15
HMGA1-204ENST00000401473 IGHV3-9P01782 118 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 GSTM3P21266 225 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 CHRNB4P30926 498 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 RPL4P36578 427 aaKnown RBP14.11□□□□□ -0.15
HMGA1-204ENST00000401473 ERVK-25P63136 954 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 LGALS3BPQ08380 585 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 SLC36A3Q495N2 470 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 CLEC12AQ5QGZ9 265 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 ARMC4Q5T2S8 1044 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 LPCAT4Q643R3 524 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 AAED1Q7RTV5 226 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 CBR4Q8N4T8 237 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 OR6K3Q8NGY3 331 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 LILRB4Q8NHJ6 448 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 FANK1Q8TC84 345 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 TMEM45BQ96B21 275 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 OPN3Q9H1Y3 402 aaPredicted RBP14.11□□□□□ -0.15
HMGA1-204ENST00000401473 TXNIPQ9H3M7 391 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 ZNF556Q9HAH1 456 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 COQ3Q9NZJ6 369 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 BAHCC1Q9P281 2608 aa14.11□□□□□ -0.15
HMGA1-204ENST00000401473 EI24O14681 340 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 SMNDC1O75940 238 aaKnown RBP eCLIP14.1□□□□□ -0.15
HMGA1-204ENST00000401473 BCL10O95999 233 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 ALPLP05186 524 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 CD14P08571 375 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 EPHA2P29317 976 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 BIDP55957 195 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 LRRC36Q1X8D7 754 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 NIPAL3Q6P499 406 aa14.1□□□□□ -0.15
HMGA1-204ENST00000401473 ZNF474Q6S9Z5 364 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms