RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 CSTBP04080 98 aaKnown RBP12.8□□□□□ -0.36
SCAF4-202ENST00000399804 IFNGR1P15260 489 aa12.8□□□□□ -0.36
SCAF4-202ENST00000399804 PITPNBP48739 271 aa12.8□□□□□ -0.36
SCAF4-202ENST00000399804 SIGLEC14Q08ET2 396 aa12.8□□□□□ -0.36
SCAF4-202ENST00000399804 EBPQ15125 230 aaKnown RBP12.8□□□□□ -0.36
SCAF4-202ENST00000399804 LINC00346Q8IVM7 164 aa12.8□□□□□ -0.36
SCAF4-202ENST00000399804 KTI12Q96EK9 354 aaPredicted RBP12.8□□□□□ -0.36
SCAF4-202ENST00000399804 FAM71F1Q96KD3 344 aaPredicted RBP12.8□□□□□ -0.36
SCAF4-202ENST00000399804 FKRPQ9H9S5 495 aa12.8□□□□□ -0.36
SCAF4-202ENST00000399804 OR6C70A6NIJ9 312 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 WDPCPO95876 746 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 CT45A8P0DMV1 189 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 CT45A9P0DMV2 189 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 CPEP16870 476 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 RPL27P61353 136 aaKnown RBP12.79□□□□□ -0.36
SCAF4-202ENST00000399804 FUT7Q11130 342 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 ZNF141Q15928 474 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 NTRK2Q16620 822 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 SCGB2B2Q4G0G5 96 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 CT45A2Q5DJT8 189 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 SLC35D3Q5M8T2 416 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 LIPNQ5VXI9 398 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 WDR74Q6RFH5 385 aaPredicted RBP12.79□□□□□ -0.36
SCAF4-202ENST00000399804 C6orf15Q6UXA7 325 aaPredicted RBP12.79□□□□□ -0.36
SCAF4-202ENST00000399804 ARIH2OSQ8N7S6 290 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 ISG20L2Q9H9L3 353 aaKnown RBP12.79□□□□□ -0.36
SCAF4-202ENST00000399804 POU2F3Q9UKI9 436 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 POLHQ9Y253 713 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 A0A1W2PNR3 127 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 DOK2O60496 412 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 APEX1P27695 318 aaKnown RBP12.79□□□□□ -0.36
SCAF4-202ENST00000399804 APOBEC1P41238 236 aaKnown RBP12.79□□□□□ -0.36
SCAF4-202ENST00000399804 OR3A3P47888 321 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 OR3A2P47893 321 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 CRYBA2P53672 197 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 CLDN12P56749 244 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 GPR85P60893 370 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 DMWDQ09019 674 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 TPBGQ13641 420 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 PYHIN1Q6K0P9 492 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 OVCH1Q7RTY7 1134 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 TPRA1Q86W33 373 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 CADM3Q8N126 398 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 FAM83FQ8NEG4 500 aaPredicted RBP12.79□□□□□ -0.36
SCAF4-202ENST00000399804 ARHGAP9Q9BRR9 750 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 IER2Q9BTL4 223 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 CACNG6Q9BXT2 260 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 HHLA2Q9UM44 414 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 NEUROG3Q9Y4Z2 214 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 LOC100509620A0A075B734 347 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 CYB5AP00167 134 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 SEMG1P04279 462 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 EIF1P41567 113 aaKnown RBP12.79□□□□□ -0.36
SCAF4-202ENST00000399804 PSPHP78330 225 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 ZNF117Q03924 483 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 RAB11BQ15907 218 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 ZMAT1Q5H9K5 638 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 STEAP3Q658P3 488 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 ZNF704Q6ZNC4 412 aaPredicted RBP12.79□□□□□ -0.36
SCAF4-202ENST00000399804 TMEM106AQ96A25 262 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 ACOXLQ9NUZ1 547 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 PLEK2Q9NYT0 353 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 FLRT3Q9NZU0 649 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 PMF1-BGLAPU3KQ54 211 aa12.79□□□□□ -0.36
SCAF4-202ENST00000399804 IL7P13232 177 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 SNRPBP14678 240 aaKnown RBP12.78□□□□□ -0.36
SCAF4-202ENST00000399804 POU3F2P20265 443 aaPredicted RBP12.78□□□□□ -0.36
SCAF4-202ENST00000399804 PER3P56645 1201 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 CLDN17P56750 224 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 E2F1Q01094 437 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 FABP5Q01469 135 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 CD226Q15762 336 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCAF4-202ENST00000399804 PTPMT1Q8WUK0 201 aaPredicted RBP12.78□□□□□ -0.36
SCAF4-202ENST00000399804 ERVMER34-1Q9H9K5 563 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 COA3Q9Y2R0 106 aaPredicted RBP12.78□□□□□ -0.36
SCAF4-202ENST00000399804 NOX1Q9Y5S8 564 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 A3GALT2U3KPV4 340 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 TANC1Q9C0D5 1861 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 TGM4P49221 684 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 DBPQ10586 325 aaPredicted RBP12.78□□□□□ -0.36
SCAF4-202ENST00000399804 TBRG1Q3YBR2 411 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 C4orf46Q504U0 113 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 ZNF100Q8IYN0 542 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 ASB17Q8WXJ9 295 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 GINS4Q9BRT9 223 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 MMP28Q9H239 520 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 APMAPQ9HDC9 416 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 NOX4Q9NPH5 578 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 FBXL4Q9UKA2 621 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 FARSAQ9Y285 508 aaKnown RBP12.78□□□□□ -0.36
SCAF4-202ENST00000399804 TRAV18A0A075B6X5 111 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 NOTOA8MTQ0 251 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 LYRM1O43325 122 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 HOXB9P17482 250 aaPredicted RBP12.78□□□□□ -0.36
SCAF4-202ENST00000399804 SLC37A1P57057 533 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 OGFOD3Q6PK18 319 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 NPSR1Q6W5P4 371 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 SLC16A12Q6ZSM3 486 aa12.78□□□□□ -0.36
SCAF4-202ENST00000399804 SLC16A9Q7RTY1 509 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms