RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 C6orf89Q6UWU4 347 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 RBMXL3Q8N7X1 1067 aaKnown RBP10.47□□□□□ -0.73
TTC28-201ENST00000397906 SLC29A1Q99808 456 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 TMEM59Q9BXS4 323 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 NDRG3Q9UGV2 375 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 PROCRQ9UNN8 238 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 CTSLP07711 333 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 ARAFP10398 606 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 GABRB3P28472 473 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 AKR1C1Q04828 323 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 KCTD11Q693B1 232 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 SIDT1Q9NXL6 827 aaKnown RBP10.47□□□□□ -0.73
TTC28-201ENST00000397906 NPFFR2Q9Y5X5 522 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 DDX60LQ5H9U9 1706 aaKnown RBP10.47□□□□□ -0.73
TTC28-201ENST00000397906 TNFRSF10CO14798 259 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 TSPAN15O95858 294 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 GABRA5P31644 462 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 S100A12P80511 92 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 BEX5Q5H9J7 111 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 NHSL2Q5HYW2 709 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 PGAP2Q9UHJ9 254 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 GLI3P10071 1580 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 ZNF891A8MT65 544 aaPredicted RBP10.46□□□□□ -0.73
TTC28-201ENST00000397906 OMGP23515 440 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 DEFB108BQ8NET1 73 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 TSLPQ969D9 159 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 ELAVL1Q15717 326 aaKnown RBP10.46□□□□□ -0.73
TTC28-201ENST00000397906 FCRLAQ7L513 359 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 SPEM1Q8N4L4 309 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 SSC5DA1L4H1 1573 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 A0A1W2PPC4 97 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 A0A1W2PPH5 198 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 A0A1W2PPV4 95 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 OR8G1Q15617 311 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 SHEQ5VZ18 495 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 LHX8Q68G74 356 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 DHRS13Q6UX07 377 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 ZFAND1Q8TCF1 268 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 HTD2P86397 168 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 NKX3-1Q99801 234 aaPredicted RBP10.46□□□□□ -0.73
TTC28-201ENST00000397906 WDR76Q9H967 626 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 RFPL3O75679 317 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 HLA-AP01891 365 aaKnown RBP10.46□□□□□ -0.73
TTC28-201ENST00000397906 GLB1P16278 677 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 GPR176Q14439 515 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 CPEB2Q7Z5Q1 589 aaKnown RBP10.46□□□□□ -0.73
TTC28-201ENST00000397906 VASH2Q86V25 355 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 CCDC32Q9BV29 185 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 EGLN1Q9GZT9 426 aa10.46□□□□□ -0.73
TTC28-201ENST00000397906 A0A1W2PNR3 127 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 P2RX1P51575 399 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 GOLM1Q8NBJ4 401 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 SGK3Q96BR1 496 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 COA3Q9Y2R0 106 aaPredicted RBP10.46□□□□□ -0.74
TTC28-201ENST00000397906 HRH3Q9Y5N1 445 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 C5orf49A4QMS7 147 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 SURF4O15260 269 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 PIAS2O75928 621 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 KITLGP21583 273 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 SMN1Q16637 294 aaKnown RBP10.46□□□□□ -0.74
TTC28-201ENST00000397906 GTPBP8Q8N3Z3 284 aaPredicted RBP10.46□□□□□ -0.74
TTC28-201ENST00000397906 C7orf50Q9BRJ6 194 aaKnown RBP10.46□□□□□ -0.74
TTC28-201ENST00000397906 FBXO4Q9UKT5 387 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 GABRPO00591 440 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 PRKACAP17612 351 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 TAS2R31P59538 309 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 GDF7Q7Z4P5 450 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 MUL1Q969V5 352 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 PRRT1Q99946 306 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 RABL2AQ9UBK7 228 aaPredicted RBP10.46□□□□□ -0.74
TTC28-201ENST00000397906 RABL2BQ9UNT1 228 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 TMEM196Q5HYL7 178 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 OVCH1Q7RTY7 1134 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 OR4M1Q8NGD0 313 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 FGGYQ96C11 551 aa10.46□□□□□ -0.74
TTC28-201ENST00000397906 DOCK2Q92608 1830 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 MSMO1Q15800 293 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 ELP4Q96EB1 424 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 B3GAT1Q9P2W7 334 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 CYCSP99999 105 aaKnown RBP10.45□□□□□ -0.74
TTC28-201ENST00000397906 ST7LQ8TDW4 575 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 TMEM106AQ96A25 262 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 MS4A6EQ96DS6 147 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 WBP1LQ9NX94 342 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 CHRNA9Q9UGM1 479 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 RNF212BA8MTL3 300 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 PRKACBP22694 351 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 TSPAN31Q12999 210 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 LIPHQ8WWY8 451 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 MYOTQ9UBF9 498 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 CDK1P06493 297 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 SNCAP37840 140 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 YBX2Q9Y2T7 364 aaKnown RBP10.45□□□□□ -0.74
TTC28-201ENST00000397906 LGALS8O00214 317 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 SLC34A2O95436 690 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 TP53P04637 393 aaPredicted RBP10.45□□□□□ -0.74
TTC28-201ENST00000397906 RAB6AP20340 208 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 EXD3Q8N9H8 876 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 RAB3CQ96E17 227 aa10.45□□□□□ -0.74
TTC28-201ENST00000397906 TAS2R16Q9NYV7 291 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms