RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 ZFP3Q96NJ6 502 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 FOXN4Q96NZ1 517 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 HCAR1Q9BXC0 346 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 IFT46Q9NQC8 304 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 TICRRQ7Z2Z1 1910 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 THADAQ6YHU6 1953 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 TMEM269A0A1B0GVZ9 245 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 PMS2P1A4D2B8 440 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 SLC35F4A4IF30 521 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 ZAR1LA6NP61 321 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF814B7Z6K7 855 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 EEF1E1-BLOC1S5C9J1V9 151 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 EEF1E1O43324 174 aaKnown RBP7.52□□□□□ -1.21
PTPRD-204ENST00000397606 PRKYO43930 277 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 MLF1P58340 268 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 TMPRSS11FQ6ZWK6 438 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF627Q7L945 461 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 FAM26EQ8N5C1 309 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 CLDN22Q8N7P3 220 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 ISOC1Q96CN7 298 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 FRMD6Q96NE9 622 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 BCL7BQ9BQE9 202 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 TXNIPQ9H3M7 391 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 ELOVL3Q9HB03 270 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 SLC25A19Q9HC21 320 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 PSORS1C1Q9UIG5 152 aa7.52□□□□□ -1.21
PTPRD-204ENST00000397606 NDRG4Q9ULP0 352 aaKnown RBP7.52□□□□□ -1.21
PTPRD-204ENST00000397606 IGHV1-45A0A0A0MS14 117 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 C21orf33P30042 268 aaPredicted RBP7.51□□□□□ -1.21
PTPRD-204ENST00000397606 CASP3P42574 277 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 OR7E24Q6IFN5 339 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 FCRLAQ7L513 359 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 DPY19L4Q7Z388 723 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF615Q8N8J6 731 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 ZSCAN4Q8NAM6 433 aaPredicted RBP7.51□□□□□ -1.21
PTPRD-204ENST00000397606 OR1J2Q8NGS2 313 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 RNASE11Q8TAA1 199 aaKnown RBP7.51□□□□□ -1.21
PTPRD-204ENST00000397606 GATA6Q92908 595 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 SPSB2Q99619 263 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 FUNDC2Q9BWH2 189 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 HHLA2Q9UM44 414 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 HS3ST3B1Q9Y662 390 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 TMEM72A0PK05 275 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 CD8B2A6NJW9 211 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 GSTT2BP0CG30 244 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 CD8BP10966 210 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 ADH6P28332 368 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 PTPN6P29350 595 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 IGLV3-21P80748 117 aaPredicted RBP7.51□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF74Q16587 644 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 THEM4Q5T1C6 240 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 TUBA3EQ6PEY2 450 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 CBLN3Q6UW01 205 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 NPSR1Q6W5P4 371 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 LINGO2Q7L985 606 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 LRRC18Q8N456 261 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 S100A16Q96FQ6 103 aaKnown RBP7.51□□□□□ -1.21
PTPRD-204ENST00000397606 TRIB1Q96RU8 372 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 PHOX2BQ99453 314 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 EMC6Q9BV81 110 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF346Q9UL40 294 aaKnown RBP7.51□□□□□ -1.21
PTPRD-204ENST00000397606 SPTBN2O15020 2390 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 CCDC182A6NF36 153 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 SLC22A20A6NK97 555 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 TNFSF11O14788 317 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 GPRIN2O60269 458 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 TIAF1O95411 115 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 HNRNPCP07910 306 aaKnown RBP eCLIP7.51□□□□□ -1.21
PTPRD-204ENST00000397606 HTR5AP47898 357 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 ENTPD1P49961 510 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 HMGA2P52926 109 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 RAC1P63000 192 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 TEKQ02763 1124 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 HNRNPA0Q13151 305 aaKnown RBP7.51□□□□□ -1.21
PTPRD-204ENST00000397606 SPINK14Q6IE38 97 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 MDGA2Q7Z553 956 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 GLB1L2Q8IW92 636 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 UXS1Q8NBZ7 420 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 INTS12Q96CB8 462 aaKnown RBP7.51□□□□□ -1.21
PTPRD-204ENST00000397606 SLC22A11Q9NSA0 550 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 DIMT1Q9UNQ2 313 aaKnown RBP7.51□□□□□ -1.21
PTPRD-204ENST00000397606 A0A1W2PPK0 400 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 UBE2QL1A1L167 161 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 SOCS6O14544 535 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 AHCYL1O43865 530 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 ZFC3H1O60293 1989 aaKnown RBP7.51□□□□□ -1.21
PTPRD-204ENST00000397606 AZGP1P25311 298 aaKnown RBP7.51□□□□□ -1.21
PTPRD-204ENST00000397606 MLLT11Q13015 90 aaPredicted RBP7.51□□□□□ -1.21
PTPRD-204ENST00000397606 RSPO4Q2I0M5 234 aaPredicted RBP7.51□□□□□ -1.21
PTPRD-204ENST00000397606 OR2A2Q6IF42 318 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 RPL22L1Q6P5R6 122 aaKnown RBP7.51□□□□□ -1.21
PTPRD-204ENST00000397606 TMEM179BQ7Z7N9 219 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 GJC3Q8NFK1 279 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 OR8S1Q8NH09 359 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 NUP210Q8TEM1 1887 aaPredicted RBP7.51□□□□□ -1.21
PTPRD-204ENST00000397606 TMEM41AQ96HV5 264 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 FAM71F1Q96KD3 344 aaPredicted RBP7.51□□□□□ -1.21
PTPRD-204ENST00000397606 SLC26A1Q9H2B4 701 aa7.51□□□□□ -1.21
PTPRD-204ENST00000397606 C12orf49Q9H741 205 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms