RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 FUT4P22083 530 aa22.33■■□□□ 1.17
TSPAN4-207ENST00000397411 HOXC12P31275 282 aa22.33■■□□□ 1.17
TSPAN4-207ENST00000397411 FOXG1P55316 489 aaPredicted RBP22.33■■□□□ 1.17
TSPAN4-207ENST00000397411 BIDP55957 195 aa22.33■■□□□ 1.17
TSPAN4-207ENST00000397411 MS4A2Q01362 244 aa22.33■■□□□ 1.17
TSPAN4-207ENST00000397411 SPIBQ01892 262 aa22.33■■□□□ 1.17
TSPAN4-207ENST00000397411 BNIP1Q12981 228 aa22.33■■□□□ 1.17
TSPAN4-207ENST00000397411 PPA1Q15181 289 aa22.33■■□□□ 1.17
TSPAN4-207ENST00000397411 BEX5Q5H9J7 111 aa22.33■■□□□ 1.17
TSPAN4-207ENST00000397411 TIMM23BQ5SRD1 257 aa22.33■■□□□ 1.17
TSPAN4-207ENST00000397411 LCN8Q6JVE9 175 aa22.33■■□□□ 1.17
TSPAN4-207ENST00000397411 PODNL1Q6PEZ8 512 aa22.33■■□□□ 1.17
TSPAN4-207ENST00000397411 CDC20BQ86Y33 519 aa22.33■■□□□ 1.17
TSPAN4-207ENST00000397411 OR6N1Q8NGY5 312 aa22.33■■□□□ 1.17
TSPAN4-207ENST00000397411 ASB9Q96DX5 294 aa22.33■■□□□ 1.17
TSPAN4-207ENST00000397411 OR2M2Q96R28 347 aa22.33■■□□□ 1.17
TSPAN4-207ENST00000397411 ZNF347Q96SE7 839 aa22.33■■□□□ 1.17
TSPAN4-207ENST00000397411 KRCC1Q9NPI7 259 aaPredicted RBP22.33■■□□□ 1.17
TSPAN4-207ENST00000397411 A0A1W2PRQ8 180 aa22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 FAM221AA4D161 298 aa22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 OR5H1A6NKK0 313 aa22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 DNAJC8O75937 253 aaPredicted RBP22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 ZNF432O94892 652 aa22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 GADD45GO95257 159 aa22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 BCL10O95999 233 aa22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 HRGP04196 525 aa22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 ITGA5P08648 1049 aa22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 AQP2P41181 271 aa22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 ROR2Q01974 943 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 RPL18Q07020 188 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 TRAP1Q12931 704 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 CAMK2DQ13557 499 aa22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 DGCR6Q14129 220 aa22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 GABRA6Q16445 453 aa22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 SSX8Q7RTT4 187 aa22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 MEX3DQ86XN8 651 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 SLC7A6OSQ96CW6 309 aaPredicted RBP22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 ADAD1Q96M93 576 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 ALKBH3Q96Q83 286 aaPredicted RBP22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 IL1RAPQ9NPH3 570 aa22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 INIPQ9NRY2 104 aa22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 TMEM5Q9Y2B1 443 aa22.32■■□□□ 1.16
TSPAN4-207ENST00000397411 MCIDASD6RGH6 385 aa22.31■■□□□ 1.16
TSPAN4-207ENST00000397411 M0R3G1 203 aa22.31■■□□□ 1.16
TSPAN4-207ENST00000397411 SEMG1P04279 462 aa22.31■■□□□ 1.16
TSPAN4-207ENST00000397411 F13BP05160 661 aa22.31■■□□□ 1.16
TSPAN4-207ENST00000397411 MAKP20794 623 aa22.31■■□□□ 1.16
TSPAN4-207ENST00000397411 LSM11P83369 360 aaKnown RBP eCLIP22.31■■□□□ 1.16
TSPAN4-207ENST00000397411 CHRNB3Q05901 458 aa22.31■■□□□ 1.16
TSPAN4-207ENST00000397411 LAPTM4AQ15012 233 aa22.31■■□□□ 1.16
TSPAN4-207ENST00000397411 OAFQ86UD1 273 aa22.31■■□□□ 1.16
TSPAN4-207ENST00000397411 OR52N5Q8NH56 324 aa22.31■■□□□ 1.16
TSPAN4-207ENST00000397411 SLC7A13Q8TCU3 470 aa22.31■■□□□ 1.16
TSPAN4-207ENST00000397411 LIPHQ8WWY8 451 aa22.31■■□□□ 1.16
TSPAN4-207ENST00000397411 MUS81Q96NY9 551 aa22.31■■□□□ 1.16
TSPAN4-207ENST00000397411 TMCC3Q9ULS5 477 aa22.31■■□□□ 1.16
TSPAN4-207ENST00000397411 EDARQ9UNE0 448 aa22.31■■□□□ 1.16
TSPAN4-207ENST00000397411 DEFB108AA8MXU0 73 aa22.3■■□□□ 1.16
TSPAN4-207ENST00000397411 PDLIM1O00151 329 aa22.3■■□□□ 1.16
TSPAN4-207ENST00000397411 GPR4P46093 362 aa22.3■■□□□ 1.16
TSPAN4-207ENST00000397411 NR1H2P55055 460 aa22.3■■□□□ 1.16
TSPAN4-207ENST00000397411 FAM98BQ52LJ0 330 aaKnown RBP22.3■■□□□ 1.16
TSPAN4-207ENST00000397411 KLHL24Q6TFL4 600 aa22.3■■□□□ 1.16
TSPAN4-207ENST00000397411 C20orf196Q8IYI0 205 aa22.3■■□□□ 1.16
TSPAN4-207ENST00000397411 TMEM123Q8N131 208 aa22.3■■□□□ 1.16
TSPAN4-207ENST00000397411 C1orf162Q8NEQ5 155 aaPredicted RBP22.3■■□□□ 1.16
TSPAN4-207ENST00000397411 OR51A7Q8NH64 312 aa22.3■■□□□ 1.16
TSPAN4-207ENST00000397411 MOSPD2Q8NHP6 518 aa22.3■■□□□ 1.16
TSPAN4-207ENST00000397411 PLPPR2Q96GM1 343 aa22.3■■□□□ 1.16
TSPAN4-207ENST00000397411 GPR35Q9HC97 309 aa22.3■■□□□ 1.16
TSPAN4-207ENST00000397411 AURKCQ9UQB9 309 aa22.3■■□□□ 1.16
TSPAN4-207ENST00000397411 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP22.29■■□□□ 1.16
TSPAN4-207ENST00000397411 A0A1W2PR80 420 aa22.29■■□□□ 1.16
TSPAN4-207ENST00000397411 KLF4O43474 513 aa22.29■■□□□ 1.16
TSPAN4-207ENST00000397411 CSNK1A1P48729 337 aa22.29■■□□□ 1.16
TSPAN4-207ENST00000397411 MELKQ14680 651 aa22.29■■□□□ 1.16
TSPAN4-207ENST00000397411 OR6X1Q8NH79 312 aa22.29■■□□□ 1.16
TSPAN4-207ENST00000397411 LRR1Q96L50 414 aa22.29■■□□□ 1.16
TSPAN4-207ENST00000397411 NDEL1Q9GZM8 345 aa22.29■■□□□ 1.16
TSPAN4-207ENST00000397411 ESRP2Q9H6T0 727 aaKnown RBP22.29■■□□□ 1.16
TSPAN4-207ENST00000397411 MAGIXQ9H6Y5 334 aa22.29■■□□□ 1.16
TSPAN4-207ENST00000397411 CRLF2Q9HC73 371 aa22.29■■□□□ 1.16
TSPAN4-207ENST00000397411 ALPK2Q86TB3 2170 aa22.29■■□□□ 1.16
TSPAN4-207ENST00000397411 NOTCH2Q04721 2471 aa22.29■■□□□ 1.16
TSPAN4-207ENST00000397411 ABCA4P78363 2273 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 ABCA12Q86UK0 2595 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 TRBV4-1A0A0J9YWV2 114 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 TCRBV5S2A0A599 114 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 GSC2O15499 205 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 CLOCKO15516 846 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 RRM2P31350 389 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 SLC9A3P48764 834 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 DAP3P51398 398 aaKnown RBP22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 UBE2NP61088 152 aaKnown RBP22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 TAF11Q15544 211 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 ANKDD1AQ495B1 522 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 ALG10Q5BKT4 473 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 NHLRC1Q6VVB1 395 aa22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 PIWIL3Q7Z3Z3 882 aaKnown RBP22.28■■□□□ 1.16
TSPAN4-207ENST00000397411 HDDC2Q7Z4H3 204 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms