RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 TAS2R10Q9NYW0 307 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 H2AFY2Q9P0M6 372 aaPredicted RBP13.44□□□□□ -0.26
CAPN3-207ENST00000397200 CHRNA9Q9UGM1 479 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 SSR3Q9UNL2 185 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 SPIN1Q9Y657 262 aaPredicted RBP13.44□□□□□ -0.26
CAPN3-207ENST00000397200 IGKV1D-42A0A075B6H8 117 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 SLC22A31A6NKX4 558 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 GABRA5P31644 462 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 CD79BP40259 229 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 RFC3P40938 356 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 PPP5CP53041 499 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 DSCR4P56555 118 aaPredicted RBP13.43□□□□□ -0.26
CAPN3-207ENST00000397200 QPRTQ15274 297 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 TOMM34Q15785 309 aaPredicted RBP13.43□□□□□ -0.26
CAPN3-207ENST00000397200 RGS21Q2M5E4 152 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 WBP2NLQ6ICG8 309 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 DCDC5Q6ZRR9 648 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 ATG4DQ86TL0 474 aaPredicted RBP13.43□□□□□ -0.26
CAPN3-207ENST00000397200 KLHL36Q8N4N3 616 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 ZFP62Q8NB50 900 aaPredicted RBP13.43□□□□□ -0.26
CAPN3-207ENST00000397200 TMEM234Q8WY98 164 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 UFD1Q92890 307 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 TNFRSF13CQ96RJ3 184 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 GPX7Q96SL4 187 aaPredicted RBP13.43□□□□□ -0.26
CAPN3-207ENST00000397200 TTTY12Q9BZ98 90 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 INPP5EQ9NRR6 644 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 TXNL4BQ9NX01 149 aaKnown RBP13.43□□□□□ -0.26
CAPN3-207ENST00000397200 TNFRSF10DQ9UBN6 386 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 DKKL1Q9UK85 242 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 VDAC3Q9Y277 283 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 PEX16Q9Y5Y5 336 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 DSPP15924 2871 aaKnown RBP13.43□□□□□ -0.26
CAPN3-207ENST00000397200 ZZEF1O43149 2961 aa13.43□□□□□ -0.26
CAPN3-207ENST00000397200 A0A087WZY1 265 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 RIIAD1A6NNX1 92 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 PRR23D1E9PI22 279 aaPredicted RBP13.42□□□□□ -0.26
CAPN3-207ENST00000397200 NDUFB2O95178 105 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 PPP1R3DO95685 299 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 LALBAP00709 142 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 TSPAN19P0C672 248 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 RFPL3SP0C7P2 107 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 PRR23D2P0DMB1 279 aaPredicted RBP13.42□□□□□ -0.26
CAPN3-207ENST00000397200 PNMTP11086 282 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 GP1BBP13224 206 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 ZNF3P17036 446 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 HK1P19367 917 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 DPP4P27487 766 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 GDF1P27539 372 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 FGF9P31371 208 aaPredicted RBP13.42□□□□□ -0.26
CAPN3-207ENST00000397200 IFITM3Q01628 133 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 TOMM20Q15388 145 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 ARSKQ6UWY0 536 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 SLC37A3Q8NCC5 494 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 OR51A7Q8NH64 312 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 ST8SIA1Q92185 356 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 PTP4A1Q93096 173 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 TIMP4Q99727 224 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 MED18Q9BUE0 208 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 CAB39Q9Y376 341 aaPredicted RBP13.42□□□□□ -0.26
CAPN3-207ENST00000397200 NCKAP5O14513 1909 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 MPDZO75970 2070 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 FAM166BA8MTA8 275 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 ACOT7O00154 380 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 AKAP8O43823 692 aaKnown RBP13.42□□□□□ -0.26
CAPN3-207ENST00000397200 OR7A10O76100 309 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 IL1AP01583 271 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 GALP22466 123 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 MST1P26927 711 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 SRD5A2P31213 254 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 RPS25P62851 125 aaKnown RBP13.42□□□□□ -0.26
CAPN3-207ENST00000397200 ZNF45Q02386 682 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 ITGADQ13349 1161 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 CRMP1Q14194 572 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 SLC35F1Q5T1Q4 408 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 SLC6A19Q695T7 634 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 ZNF322Q6U7Q0 402 aaPredicted RBP13.42□□□□□ -0.26
CAPN3-207ENST00000397200 LHFPL3Q86UP9 236 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 SLC22A16Q86VW1 577 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 CENPSQ8N2Z9 138 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 ACBD7Q8N6N7 88 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 EXD3Q8N9H8 876 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 GATAD2BQ8WXI9 593 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 SLC39A7Q92504 469 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 COX4I2Q96KJ9 171 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 COQ7Q99807 217 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 MROQ9BYG7 248 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 BARHL1Q9BZE3 327 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 ZNF703Q9H7S9 590 aaPredicted RBP13.42□□□□□ -0.26
CAPN3-207ENST00000397200 MED20Q9H944 212 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 EXOSC4Q9NPD3 245 aaKnown RBP13.42□□□□□ -0.26
CAPN3-207ENST00000397200 KLHL21Q9UJP4 597 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 PKD1L2Q7Z442 2459 aa13.42□□□□□ -0.26
CAPN3-207ENST00000397200 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 TRDV1A0A1B0GX56 115 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 ERVH48-1M5A8F1 160 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 ARPC3O15145 178 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 TRAPPC6AO75865 159 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 GLSO94925 669 aaPredicted RBP13.41□□□□□ -0.26
CAPN3-207ENST00000397200 IFNGP01579 166 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 SFTPCP11686 197 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms