RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 GSG1LQ6UXU4 331 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 B3GLCTQ6Y288 498 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 SPRED1Q7Z699 444 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 SFTPA1Q8IWL2 248 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 ANKRD53Q8N9V6 530 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 PFN4Q8NHR9 129 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 TSPAN10Q9H1Z9 355 aaPredicted RBP9.43□□□□□ -0.9
PKP4-201ENST00000389757 SPNS1Q9H2V7 528 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 MGAT4CQ9UBM8 478 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 ASB4Q9Y574 426 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 POLR2AP24928 1970 aaKnown RBP9.43□□□□□ -0.9
PKP4-201ENST00000389757 BCKDHBP21953 392 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 CRHBPP24387 322 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 CDK2P24941 298 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 CHRNB4P30926 498 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 HSF1Q00613 529 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 IHHQ14623 411 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 SMN1Q16637 294 aaKnown RBP9.43□□□□□ -0.9
PKP4-201ENST00000389757 SLC35D3Q5M8T2 416 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 NRG4Q8WWG1 115 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 WWTR1Q9GZV5 400 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 NDRG4Q9ULP0 352 aaKnown RBP9.43□□□□□ -0.9
PKP4-201ENST00000389757 B3GALT1Q9Y5Z6 326 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 DOK2O60496 412 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 S100A9P06702 114 aaKnown RBP9.43□□□□□ -0.9
PKP4-201ENST00000389757 CD34P28906 385 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 RPS23P62266 143 aaKnown RBP9.43□□□□□ -0.9
PKP4-201ENST00000389757 EMX1Q04741 257 aaPredicted RBP9.43□□□□□ -0.9
PKP4-201ENST00000389757 CNIH2Q6PI25 160 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 RBM45Q8IUH3 476 aaKnown RBP9.43□□□□□ -0.9
PKP4-201ENST00000389757 NKAIN4Q8IVV8 208 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 CENPSQ8N2Z9 138 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 ZNF511Q8NB15 262 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 OR4D9Q8NGE8 314 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 ZNF226Q9NYT6 803 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 HRO43593 1189 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 BCAS1O75363 584 aaPredicted RBP9.43□□□□□ -0.9
PKP4-201ENST00000389757 CRYABP02511 175 aaKnown RBP9.43□□□□□ -0.9
PKP4-201ENST00000389757 HTR1FP30939 366 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 GRB2P62993 217 aaKnown RBP9.43□□□□□ -0.9
PKP4-201ENST00000389757 DNAJC22Q8N4W6 341 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 OR4K15Q8NH41 348 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 MIB2Q96AX9 1013 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 SPACA9Q96E40 222 aaPredicted RBP9.43□□□□□ -0.9
PKP4-201ENST00000389757 FKBP14Q9NWM8 211 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 CD300AQ9UGN4 299 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 PCDHGA1Q9Y5H4 931 aa9.43□□□□□ -0.9
PKP4-201ENST00000389757 TAF1LQ8IZX4 1826 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 QSER1Q2KHR3 1735 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 A0A087WZY1 265 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 A0A0A6YYD5 115 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 IGHV5-51A0A0C4DH38 117 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 A0A1W2PNR3 127 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 FUOMA2VDF0 154 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 AGAP5A6NIR3 686 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 OR6C65A6NJZ3 312 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 FCMRO60667 390 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 FZD7O75084 574 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 OR7C1O76099 320 aaPredicted RBP9.42□□□□□ -0.9
PKP4-201ENST00000389757 MMP11P24347 488 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 MEP1BQ16820 701 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 EXOSC6Q5RKV6 272 aaKnown RBP9.42□□□□□ -0.9
PKP4-201ENST00000389757 HES3Q5TGS1 186 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 COX15Q7KZN9 410 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 ZNF695Q8IW36 515 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 SERPINA12Q8IW75 414 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 SGPP2Q8IWX5 399 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 BEST3Q8N1M1 668 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 OR1L3Q8NH93 324 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 C22orf15Q8WYQ4 148 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 CNRIP1Q96F85 164 aaPredicted RBP9.42□□□□□ -0.9
PKP4-201ENST00000389757 HRASLS5Q96KN8 279 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 MRGPRX4Q96LA9 322 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 NIPSNAP1Q9BPW8 284 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 POLE4Q9NR33 117 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 TRAV17A0A0B4J275 112 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 GLCEO94923 617 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 FOLR1P15328 257 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 TPRA1Q86W33 373 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 HSD17B8Q92506 261 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 SNAPC3Q92966 411 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 VRK1Q99986 396 aaPredicted RBP9.42□□□□□ -0.9
PKP4-201ENST00000389757 GMEB1Q9Y692 573 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 SOCS6O14544 535 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 DVL2O14641 736 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 CXCL13O43927 109 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 CBR3O75828 277 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 BDKRB2P30411 391 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 KIR2DL1P43626 348 aaPredicted RBP9.42□□□□□ -0.9
PKP4-201ENST00000389757 AIMP2Q13155 320 aaKnown RBP9.42□□□□□ -0.9
PKP4-201ENST00000389757 UBE2UQ5VVX9 321 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 ABI3BPQ7Z7G0 1075 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 NAXDQ8IW45 347 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 SPIN2AQ99865 258 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 SPIN2BQ9BPZ2 258 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 EMC6Q9BV81 110 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 ZFP57Q9NU63 452 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 P4HTMQ9NXG6 502 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 TTC3P53804 2025 aa9.42□□□□□ -0.9
PKP4-201ENST00000389757 PRAMEF4O60810 478 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms