RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 FXYD6Q9H0Q3 95 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 TMEM9BQ9NQ34 198 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 PRDM6Q9NQX0 595 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 HHLA2Q9UM44 414 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 EXO1Q9UQ84 846 aaKnown RBP12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 DNAJC13O75165 2243 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 METTL15A6NJ78 407 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 PATE3B3GLJ2 98 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 GPRIN2O60269 458 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 AKR7A3O95154 331 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 DDAH2O95865 285 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 ERGP11308 486 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 SPNP16150 400 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 ZFP36L2P47974 494 aaKnown RBP12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 TGM4P49221 684 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 OLFML2AQ68BL7 652 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 PM20D2Q8IYS1 436 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 SLC35B4Q969S0 331 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 CPNE2Q96FN4 548 aaPredicted RBP12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 CDC6Q99741 560 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 EMC6Q9BV81 110 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 PLA2G12AQ9BZM1 189 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 LAT2Q9GZY6 243 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 TBC1D24Q9ULP9 559 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 PLEKHA6Q9Y2H5 1048 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 ACACAQ13085 2346 aa12.98□□□□□ -0.33
SHROOM1-203ENST00000378679 FRG2CA6NGY1 282 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 CBX7O95931 251 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 VAMP1P23763 118 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 EVI2BP34910 448 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 ETV5P41161 510 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 ETV1P50549 477 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 CLDN17P56750 224 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 ATXN7L3Q14CW9 347 aaPredicted RBP12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 RAB11BQ15907 218 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 TMPPEQ6ZT21 453 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 NPRL2Q8WTW4 380 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 CCDC88CQ9P219 2028 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 MT-ATP6P00846 226 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 CD46P15529 392 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 PTPN6P29350 595 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 TMEM17Q86X19 198 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 GDPD1Q8N9F7 314 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 ARHGDIGQ99819 225 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 DUSP15Q9H1R2 295 aaPredicted RBP12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 POLHQ9Y253 713 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 OR6C76A6NM76 312 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 GTF2F2P13984 249 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 HMGA2P52926 109 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 CCDC58Q4VC31 144 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 H1FNTQ75WM6 255 aaPredicted RBP12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 BBS1Q8NFJ9 593 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 HOXB13Q92826 284 aaPredicted RBP12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 FER1L6-AS2Q96M78 137 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 TSSK2Q96PF2 358 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 CCDC32Q9BV29 185 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 CACNG6Q9BXT2 260 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 SLC7A11Q9UPY5 501 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 VWA8A3KMH1 1905 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 TRAV18A0A075B6X5 111 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 PRSS23O95084 383 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 SHC1P29353 583 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 TMEM244Q5VVB8 128 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 SLC25A24Q6NUK1 477 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 ABHD12BQ7Z5M8 362 aaPredicted RBP12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 NANOGP1Q8N7R0 232 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 SLC25A44Q96H78 314 aaPredicted RBP12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 URM1Q9BTM9 101 aaKnown RBP12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 ZNF639Q9UID6 485 aa12.97□□□□□ -0.33
SHROOM1-203ENST00000378679 NCR1O76036 304 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 SLC35A1P78382 337 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 DUSP2Q05923 314 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 NKAPLQ5M9Q1 402 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 C16orf47Q6ZP98 133 aaPredicted RBP12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 OR52N1Q8NH53 320 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 THOC3Q96J01 351 aaKnown RBP12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 ZNF681Q96N22 645 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 CDCA4Q9BXL8 241 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 ZNF281Q9Y2X9 895 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 GRIP1Q9Y3R0 1128 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 CYR61O00622 381 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 SELENOFO60613 162 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 HPGDSO60760 199 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 APOC3P02656 99 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 SDHBP21912 280 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 NTRK2Q16620 822 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 MEP1BQ16820 701 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 TATDN3Q17R31 274 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 C9orf135Q5VTT2 229 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 PWWP2BQ6NUJ5 590 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 GDPD3Q7L5L3 318 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 LINC00346Q8IVM7 164 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 TMEM99Q8N816 258 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 IER2Q9BTL4 223 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 V9GY05 133 aa12.96□□□□□ -0.33
SHROOM1-203ENST00000378679 A0A1B0GTQ1 180 aa12.96□□□□□ -0.34
SHROOM1-203ENST00000378679 A0A1W2PNR3 127 aa12.96□□□□□ -0.34
SHROOM1-203ENST00000378679 POM121CA8CG34 1229 aa12.96□□□□□ -0.34
SHROOM1-203ENST00000378679 SSX4O60224 188 aa12.96□□□□□ -0.34
SHROOM1-203ENST00000378679 GLCEO94923 617 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms