RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 SRA1Q9HD15 236 aaKnown RBP16.42■□□□□ 0.22
GNE-201ENST00000377902 EXOSC3Q9NQT5 275 aaKnown RBP16.42■□□□□ 0.22
GNE-201ENST00000377902 MRM2Q9UI43 246 aaKnown RBP16.42■□□□□ 0.22
GNE-201ENST00000377902 OR6C65A6NJZ3 312 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 A8MXK9 166 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 ITGA10O75578 1167 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 FBXO45P0C2W1 286 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 GABRA1P14867 456 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 RBM34P42696 430 aaKnown RBP16.41■□□□□ 0.22
GNE-201ENST00000377902 ADPRHP54922 357 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 LGALS3BPQ08380 585 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 ULK3Q6PHR2 472 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 GATSQ8NAP1 163 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 ARID1BQ8NFD5 2236 aaPredicted RBP16.41■□□□□ 0.22
GNE-201ENST00000377902 OR52H1Q8NGJ2 320 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 PNPLA2Q96AD5 504 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 CTHRC1Q96CG8 243 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 OR2M4Q96R27 311 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 MKKSQ9NPJ1 570 aaPredicted RBP16.41■□□□□ 0.22
GNE-201ENST00000377902 LRIT1Q9P2V4 623 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 CTNSO60931 367 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 UPK3AO75631 287 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 NKX2-2O95096 273 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 C4BPBP20851 252 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 C5AR1P21730 350 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 AQP2P41181 271 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 ACTR1BP42025 376 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 ARHGDIBP52566 201 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 ACTR1AP61163 376 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 LTBQ06643 244 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 ILF3Q12906 894 aaKnown RBP eCLIP16.41■□□□□ 0.22
GNE-201ENST00000377902 BAMBIQ13145 260 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 GAS6Q14393 721 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 LRRTM1Q86UE6 522 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 OR5AK2Q8NH90 309 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 OR1S1Q8NH92 325 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 SPACA7Q96KW9 195 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 NMNAT2Q9BZQ4 307 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 RXFP3Q9NSD7 469 aa16.41■□□□□ 0.22
GNE-201ENST00000377902 TMEM272A0A1B0GTI8 110 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 TUBAL3A6NHL2 446 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 SNRPGP15A8MWD9 76 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 SULT1B1O43704 296 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 RAD1O60671 282 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 GLSO94925 669 aaPredicted RBP16.4■□□□□ 0.22
GNE-201ENST00000377902 KDM4BO94953 1096 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 IL5P05113 134 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 CD1AP06126 327 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 RAB40ALP0C0E4 278 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 ZNF273Q14593 569 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 FAM122CQ6P4D5 195 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 GSG1LQ6UXU4 331 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 DPY19L2P2Q6ZN68 376 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 OR51S1Q8NGJ8 323 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 OR4C3Q8NH37 302 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 RPS4Y2Q8TD47 263 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 SCARB1Q8WTV0 552 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 RAB40AQ8WXH6 277 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 ADAD1Q96M93 576 aaKnown RBP16.4■□□□□ 0.22
GNE-201ENST00000377902 GAL3ST1Q99999 423 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 TMPRSS13Q9BYE2 586 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 TMEM138Q9NPI0 162 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 SESN1Q9Y6P5 492 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 OR10H2O60403 315 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 B3GALNT1O75752 331 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 F13BP05160 661 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 PPP1CAP62136 330 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 MAT1AQ00266 395 aaKnown RBP16.4■□□□□ 0.22
GNE-201ENST00000377902 IL10RAQ13651 578 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 Q499Y3 187 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 ESX1Q8N693 406 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 OR51D1Q8NGF3 324 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 LMAN2LQ9H0V9 348 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 PFDN2Q9UHV9 154 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 HEBP2Q9Y5Z4 205 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 TRANK1O15050 2925 aa16.4■□□□□ 0.22
GNE-201ENST00000377902 TOR1AO14656 332 aa16.39■□□□□ 0.22
GNE-201ENST00000377902 RDH16O75452 317 aa16.39■□□□□ 0.22
GNE-201ENST00000377902 RBBP9O75884 186 aa16.39■□□□□ 0.22
GNE-201ENST00000377902 RLN2P04090 185 aa16.39■□□□□ 0.22
GNE-201ENST00000377902 CALCBP10092 127 aa16.39■□□□□ 0.22
GNE-201ENST00000377902 DLX5P56178 289 aa16.39■□□□□ 0.22
GNE-201ENST00000377902 SORDQ00796 357 aa16.39■□□□□ 0.22
GNE-201ENST00000377902 ZNF660Q6AZW8 331 aaPredicted RBP16.39■□□□□ 0.22
GNE-201ENST00000377902 RNF44Q7L0R7 432 aa16.39■□□□□ 0.22
GNE-201ENST00000377902 CA13Q8N1Q1 262 aa16.39■□□□□ 0.22
GNE-201ENST00000377902 EID2Q8N6I1 236 aa16.39■□□□□ 0.22
GNE-201ENST00000377902 CAMKVQ8NCB2 501 aa16.39■□□□□ 0.22
GNE-201ENST00000377902 RCBTB1Q8NDN9 531 aa16.39■□□□□ 0.22
GNE-201ENST00000377902 BVESQ8NE79 360 aa16.39■□□□□ 0.22
GNE-201ENST00000377902 AIFM2Q9BRQ8 373 aa16.39■□□□□ 0.22
GNE-201ENST00000377902 UTP23Q9BRU9 249 aaKnown RBP16.39■□□□□ 0.22
GNE-201ENST00000377902 ZC4H2Q9NQZ6 224 aa16.39■□□□□ 0.22
GNE-201ENST00000377902 ACTR10Q9NZ32 417 aa16.39■□□□□ 0.22
GNE-201ENST00000377902 FBXL21Q9UKT6 434 aa16.39■□□□□ 0.22
GNE-201ENST00000377902 URADA6NGE7 173 aa16.39■□□□□ 0.21
GNE-201ENST00000377902 GLCEO94923 617 aa16.39■□□□□ 0.21
GNE-201ENST00000377902 ALKBH1Q13686 389 aaKnown RBP16.39■□□□□ 0.21
GNE-201ENST00000377902 RUNX3Q13761 415 aa16.39■□□□□ 0.21
GNE-201ENST00000377902 GPR18Q14330 331 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms