RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 ACTG2P63267 376 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 FOXK2Q01167 660 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 SCRN3Q0VDG4 424 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 CBX3Q13185 183 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 SLC36A2Q495M3 483 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 NADK2Q4G0N4 442 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 CCDC54Q8NEL0 328 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 OR5AK2Q8NH90 309 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 ST8SIA1Q92185 356 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 HTRA1Q92743 480 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 PDCD10Q9BUL8 212 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 PAPOLGQ9BWT3 736 aaKnown RBP7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 ZNF442Q9H7R0 627 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 LOC102725191A0A1B0GVB3 256 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 CDHR4A6H8M9 788 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 A6NIN4 97 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 ANKRD30BLA7E2S9 258 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 CCRL2O00421 344 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 TSC22D2O75157 780 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 AGFG2O95081 481 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 CD97P48960 835 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 UCNP55089 124 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 ZNF117Q03924 483 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 SPIN3Q5JUX0 258 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 MZT2BQ6NZ67 158 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 PTPMT1Q8WUK0 201 aaPredicted RBP7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 HSD17B8Q92506 261 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 CCDC120Q96HB5 630 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 CSPG4Q6UVK1 2322 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 ZNF407Q9C0G0 2248 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 OR6C70A6NIJ9 312 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 H3BNX3 289 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 SOCS6O14544 535 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 TIMM8AO60220 97 aaPredicted RBP7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 OR7A10O76100 309 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 NUP62P37198 522 aaPredicted RBP7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 DAPP51397 102 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 RORCP51449 518 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 DSCR4P56555 118 aaPredicted RBP7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 CLN3Q13286 438 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 LRRN1Q6UXK5 716 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 PRR18Q8N4B5 295 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 MIB2Q96AX9 1013 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 MRGPRX4Q96LA9 322 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 TUBA1CQ9BQE3 449 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 C1orf198Q9H425 327 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 PALMDQ9NP74 551 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 CHST11Q9NPF2 352 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 ZNF701Q9NV72 531 aaPredicted RBP7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 GPATCH2Q9NW75 528 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 NDRG3Q9UGV2 375 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 ZNF814B7Z6K7 855 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 HTR3BO95264 441 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 PRPH2P23942 346 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 CBX5P45973 191 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 RAB25P57735 213 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 MVKQ03426 396 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 RPL18Q07020 188 aaKnown RBP7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 CDK5R2Q13319 367 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 OR2G6Q5TZ20 316 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 ZNF574Q6ZN55 896 aaPredicted RBP7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 RIMKLAQ8IXN7 391 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 OR2V1Q8NHB1 315 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 CPNE2Q96FN4 548 aaPredicted RBP7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 C4orf36Q96KX1 117 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 OR10A2Q9H208 303 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 CPNE5Q9HCH3 593 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 ASH2LQ9UBL3 628 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 HS3ST3B1Q9Y662 390 aa7.7□□□□□ -1.18
CRNKL1-202ENST00000377340 CCDC168Q8NDH2 2452 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 LOC101059948A0A1B0GTJ6 334 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 TCRBV16S1A1N1A0A5B0 115 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 ACOT8O14734 319 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 SSNA1O43805 119 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 VAMP5O95183 116 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 FAM87AP0C7U9 286 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 FGF5P12034 268 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 ZNF35P13682 527 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 CD82P27701 267 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 THBS2P35442 1172 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 PSG6Q00889 435 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 MFAP5Q13361 173 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 ZNF846Q147U1 533 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 POU4F3Q15319 338 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 SCGB2B2Q4G0G5 96 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 PLAG1Q6DJT9 500 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 JMJD6Q6NYC1 403 aaPredicted RBP7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 ZNF773Q6PK81 442 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 TRAPPC6BQ86SZ2 158 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 SLC38A9Q8NBW4 561 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 FNDC9Q8TBE3 224 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 TRUB1Q8WWH5 349 aaKnown RBP7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 CD300AQ9UGN4 299 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 DTX4Q9Y2E6 619 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 DNAH12Q6ZR08 3092 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 C19orf67A6NJJ6 358 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 SNPHO15079 494 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 FAM157BP0CG42 384 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 CD59P13987 128 aa7.69□□□□□ -1.18
CRNKL1-202ENST00000377340 SLC2A5P22732 501 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms