RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 TMEM246Q9BRR3 403 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 ALG12Q9BV10 488 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 TTYH1Q9H313 450 aaPredicted RBP8.69□□□□□ -1.02
TRIM39-202ENST00000376659 KLHL1Q9NR64 748 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 SLC22A11Q9NSA0 550 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 VSX1Q9NZR4 365 aaPredicted RBP8.69□□□□□ -1.02
TRIM39-202ENST00000376659 MMACHCQ9Y4U1 282 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 COL6A3P12111 3177 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 F5P12259 2224 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 IGLV1-36A0A0B4J1U3 117 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 OR4C45A6NMZ5 311 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 TTLL8A6PVC2 850 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 FTCDNL1E5RQL4 147 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 EEF1E1O43324 174 aaKnown RBP8.69□□□□□ -1.02
TRIM39-202ENST00000376659 DOK2O60496 412 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 CD14P08571 375 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 CXCL3P19876 107 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 CD27P26842 260 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 PSMB10P40306 273 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 GNG2P59768 71 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 MZT2BQ6NZ67 158 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 OR1L3Q8NH93 324 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 SLC46A1Q96NT5 459 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 NUDT9Q9BW91 350 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 UBQLN4Q9NRR5 601 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 OR5V1Q9UGF6 321 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 FBXL3Q9UKT7 428 aa8.69□□□□□ -1.02
TRIM39-202ENST00000376659 TMEM200CA6NKL6 621 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 C17orf105B2RV13 164 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 ZNF593O00488 134 aaPredicted RBP8.68□□□□□ -1.02
TRIM39-202ENST00000376659 GNB5O14775 395 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 AKR7A2O43488 359 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 SERPINA3P01011 423 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 DHODHQ02127 395 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 SERTAD2Q14140 314 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 HSD17B12Q53GQ0 312 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 PLCZ1Q86YW0 608 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 CADM2Q8N3J6 435 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 D2HGDHQ8N465 521 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 METTL27Q8N6F8 245 aaPredicted RBP8.68□□□□□ -1.02
TRIM39-202ENST00000376659 ZNF527Q8NB42 609 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 AKAP1Q92667 903 aaKnown RBP eCLIP8.68□□□□□ -1.02
TRIM39-202ENST00000376659 OTULINQ96BN8 352 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 KLHDC7BQ96G42 594 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 SLC41A2Q96JW4 573 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 PELOQ9BRX2 385 aaKnown RBP8.68□□□□□ -1.02
TRIM39-202ENST00000376659 GON7Q9BXV9 100 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 SEMA4CQ9C0C4 833 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 TSPAN10Q9H1Z9 355 aaPredicted RBP8.68□□□□□ -1.02
TRIM39-202ENST00000376659 CACYBPQ9HB71 228 aaKnown RBP8.68□□□□□ -1.02
TRIM39-202ENST00000376659 MRPL22Q9NWU5 206 aaKnown RBP8.68□□□□□ -1.02
TRIM39-202ENST00000376659 KCNN3Q9UGI6 736 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 MOKQ9UQ07 419 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 SPTBP11277 2137 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 LY6G6EA0A0G2JKS1 128 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 ORC5O43913 435 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 ERP29P30040 261 aaKnown RBP8.68□□□□□ -1.02
TRIM39-202ENST00000376659 PCK2Q16822 640 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 ST3GAL2Q16842 350 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 ELFN2Q5R3F8 820 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 PLET1Q6UQ28 207 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 BAIAP2L2Q6UXY1 529 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 TMPRSS9Q7Z410 1059 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 SLC35F3Q8IY50 421 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 CADM4Q8NFZ8 388 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 SLC25A28Q96A46 364 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 NPAS1Q99742 590 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 EMC7Q9NPA0 242 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 NPDC1Q9NQX5 325 aaPredicted RBP8.68□□□□□ -1.02
TRIM39-202ENST00000376659 STMN3Q9NZ72 180 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 PPIEQ9UNP9 301 aaKnown RBP8.68□□□□□ -1.02
TRIM39-202ENST00000376659 ZNF281Q9Y2X9 895 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 NUBP2Q9Y5Y2 271 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 U3KQA8 63 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 TRAV8-7A0A075B6U6 113 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 ALG1L2C9J202 215 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 LMO7DNF2Z398 122 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 MBTPS2O43462 519 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 DKK1O94907 266 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 TCRBP04435 133 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 KRT8P05787 483 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 SRFP11831 508 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 ALOX5APP20292 161 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 MAP2K6P52564 334 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 GPLD1P80108 840 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 STX4Q12846 297 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 PXDC1Q5TGL8 231 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 NKAIN2Q5VXU1 208 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 LEG1Q6P5S2 330 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 LYPD8Q6UX82 237 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 C19orf18Q8NEA5 215 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 OR51A4Q8NGJ6 313 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 MMABQ96EY8 250 aaPredicted RBP8.68□□□□□ -1.02
TRIM39-202ENST00000376659 SPOCK3Q9BQ16 436 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 PCED1AQ9H1Q7 454 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 SCPEP1Q9HB40 452 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 GNG8Q9UK08 70 aa8.68□□□□□ -1.02
TRIM39-202ENST00000376659 TRBV2A0A0J9YWF9 115 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 ANKRD20A5PA0PJZ0 165 aa8.67□□□□□ -1.02
TRIM39-202ENST00000376659 CENPXA8MT69 81 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms