RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 CRLF2Q9HC73 371 aa12.47□□□□□ -0.41
CLCN6-203ENST00000376490 NANSQ9NR45 359 aa12.47□□□□□ -0.41
CLCN6-203ENST00000376490 ZNF701Q9NV72 531 aaPredicted RBP12.47□□□□□ -0.41
CLCN6-203ENST00000376490 MGAT4BQ9UQ53 548 aa12.47□□□□□ -0.41
CLCN6-203ENST00000376490 AP3M1Q9Y2T2 418 aa12.47□□□□□ -0.41
CLCN6-203ENST00000376490 NOX1Q9Y5S8 564 aa12.47□□□□□ -0.41
CLCN6-203ENST00000376490 MAGED1Q9Y5V3 778 aaPredicted RBP12.47□□□□□ -0.41
CLCN6-203ENST00000376490 VPS13CQ709C8 3753 aa12.47□□□□□ -0.41
CLCN6-203ENST00000376490 M0R3G1 203 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 OVOL3O00110 214 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 CXCR6O00574 342 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 GSTA4O15217 222 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 AKAP8O43823 692 aaKnown RBP12.46□□□□□ -0.41
CLCN6-203ENST00000376490 WNT11O96014 354 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 PAX1P15863 534 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 GSK3BP49841 420 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 CDH11P55287 796 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 RPS4XP62701 263 aaKnown RBP12.46□□□□□ -0.41
CLCN6-203ENST00000376490 CAMK2DQ13557 499 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 CEACAM16Q2WEN9 425 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 ANKRD16Q6P6B7 361 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 KLHL24Q6TFL4 600 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 HACD2Q6Y1H2 254 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 C20orf196Q8IYI0 205 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 TMEM255BQ8WV15 326 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 CMTM5Q96DZ9 223 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 Q96MF0 132 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 SLC19A3Q9BZV2 496 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 NSRP1Q9H0G5 558 aaKnown RBP12.46□□□□□ -0.41
CLCN6-203ENST00000376490 NELFAQ9H3P2 528 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 GSX1Q9H4S2 264 aaPredicted RBP12.46□□□□□ -0.41
CLCN6-203ENST00000376490 FKRPQ9H9S5 495 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 SNX13Q9Y5W8 968 aa12.46□□□□□ -0.41
CLCN6-203ENST00000376490 ARFGEF3Q5TH69 2177 aa12.46□□□□□ -0.42
CLCN6-203ENST00000376490 ZNF726A6NNF4 738 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 TMCC2O75069 709 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 OR5F1O95221 314 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 OR6A2O95222 327 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 MT-ND1P03886 318 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 HIST1H2ABP04908 130 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 ASAH2BP0C7U1 165 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 UMPSP11172 480 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 IFNGR1P15260 489 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 FUT4P22083 530 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 CDKN1AP38936 164 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 YAP1P46937 504 aaKnown RBP12.45□□□□□ -0.42
CLCN6-203ENST00000376490 UGT2B15P54855 530 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 ATP5J2P56134 94 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 UBE2NP61088 152 aaKnown RBP12.45□□□□□ -0.42
CLCN6-203ENST00000376490 PSME3P61289 254 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 ZP4Q12836 540 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 C1QTNF12Q5T7M4 302 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 PRSS57Q6UWY2 283 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 B3GLCTQ6Y288 498 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 HIST3H2AQ7L7L0 130 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 SLC46A3Q7Z3Q1 461 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 VTCN1Q7Z7D3 282 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 DEPDC4Q8N2C3 294 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 ANKK1Q8NFD2 765 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 PFN4Q8NHR9 129 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 HIST1H2ACQ93077 130 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 POLR2J2Q9GZM3 115 aaKnown RBP12.45□□□□□ -0.42
CLCN6-203ENST00000376490 POLR2J3Q9H1A7 115 aaKnown RBP12.45□□□□□ -0.42
CLCN6-203ENST00000376490 ALG2Q9H553 416 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 C20orf141Q9NUB4 165 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 POU2F3Q9UKI9 436 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 MOKQ9UQ07 419 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 ATP23Q9Y6H3 246 aa12.45□□□□□ -0.42
CLCN6-203ENST00000376490 CHD3Q12873 2000 aaKnown RBP12.45□□□□□ -0.42
CLCN6-203ENST00000376490 ARPC4-TTLL3A0A0A6YYG9 625 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 IGHV1-18A0A0C4DH31 117 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 BLOC1S5-TXNDC5H3BN57 136 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 RNF13O43567 381 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 SEC14L2O76054 403 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 ZNF682O95780 498 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 FOSL1P15407 271 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 NCK1P16333 377 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 FUT1P19526 365 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 PRDX6P30041 224 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 RBM34P42696 430 aaKnown RBP12.44□□□□□ -0.42
CLCN6-203ENST00000376490 SH3BGRP55822 239 aaPredicted RBP12.44□□□□□ -0.42
CLCN6-203ENST00000376490 BIDP55957 195 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 SLC35D2Q76EJ3 337 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 PIGWQ7Z7B1 504 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 CIARTQ8N365 385 aaPredicted RBP12.44□□□□□ -0.42
CLCN6-203ENST00000376490 OR6N1Q8NGY5 312 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 MAGEE2Q8TD90 523 aaPredicted RBP12.44□□□□□ -0.42
CLCN6-203ENST00000376490 TMEM239Q8WW34 195 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 LZICQ8WZA0 190 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 GTPBP3Q969Y2 492 aaKnown RBP12.44□□□□□ -0.42
CLCN6-203ENST00000376490 C18orf12Q96KH6 178 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 LRR1Q96L50 414 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 SMR3AQ99954 134 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 DHRS9Q9BPW9 319 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 TRAF4Q9BUZ4 470 aaPredicted RBP12.44□□□□□ -0.42
CLCN6-203ENST00000376490 OBP2BQ9NPH6 170 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 RHCGQ9UBD6 479 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 ZNF229Q9UJW7 825 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 A4GNTQ9UNA3 340 aa12.44□□□□□ -0.42
CLCN6-203ENST00000376490 ATP6V1G2-DDX39BF2Z307 99 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms