RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 USF2Q15853 346 aaPredicted RBP6.02□□□□□ -1.45
SMC1A-202ENST00000375340 TCTN1Q2MV58 587 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 DPY19L2P2Q6ZN68 376 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 PRR18Q8N4B5 295 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 BCORP1Q8N888 145 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 GPR32P1Q8NGA4 272 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 PATE1Q8WXA2 126 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 DIO2Q92813 273 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 TSPAN10Q9H1Z9 355 aaPredicted RBP6.02□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF442Q9H7R0 627 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 HRASLSQ9HDD0 168 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 BORCS7-ASMTA0A0B4J1R7 106 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 TRBV11-1A0A0K0K1C0 115 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 OR2W5A6NFC9 320 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 CCDC85CA6NKD9 419 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 ATP1B1P05026 303 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 HOXB5P09067 269 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 PTHLHP12272 177 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 ADH6P28332 368 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 POU3F1Q03052 451 aaPredicted RBP6.02□□□□□ -1.45
SMC1A-202ENST00000375340 AANATQ16613 207 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 Q499Y3 187 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 MEX3BQ6ZN04 569 aaKnown RBP6.02□□□□□ -1.45
SMC1A-202ENST00000375340 OR4D11Q8NGI4 311 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 OR5D18Q8NGL1 313 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 SLC22A8Q8TCC7 542 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 UPRTQ96BW1 309 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 KCTD12Q96CX2 325 aaKnown RBP6.02□□□□□ -1.45
SMC1A-202ENST00000375340 MCOLN1Q9GZU1 580 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 NARFLQ9H6Q4 476 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 WDR76Q9H967 626 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 PLEKHB1Q9UF11 243 aaPredicted RBP6.02□□□□□ -1.45
SMC1A-202ENST00000375340 CCL27Q9Y4X3 112 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 MN1Q10571 1320 aaPredicted RBP6.02□□□□□ -1.45
SMC1A-202ENST00000375340 TMEM269A0A1B0GVZ9 245 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 FGF17O60258 216 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 TMEM225BP0DP42 221 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 GAAP10253 952 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 CD6P30203 668 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 RPS27P42677 84 aaKnown RBP6.02□□□□□ -1.45
SMC1A-202ENST00000375340 AKR1C2P52895 323 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 CLDN6P56747 220 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 AKR1C1Q04828 323 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 CHRDL2Q6WN34 429 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 NRSN2Q9GZP1 204 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 SYT5O00445 386 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 KCNJ13O60928 360 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 TPT1P13693 172 aaKnown RBP6.02□□□□□ -1.45
SMC1A-202ENST00000375340 NME2P22392 152 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 RAP2BP61225 183 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 CXADRP78310 365 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 BCL2A1Q16548 175 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 COMTD1Q86VU5 262 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 MED18Q9BUE0 208 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF160Q9HCG1 818 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 REV1Q9UBZ9 1251 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 CEP290O15078 2479 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 C1orf196B1AJZ1 125 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 RAB40ALP0C0E4 278 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 YIF1BQ5BJH7 314 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF585AQ6P3V2 769 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 BATF2Q8N1L9 274 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 OR1J4Q8NGS1 313 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 RAB40AQ8WXH6 277 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 PRRT1Q99946 306 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 ARPC5LQ9BPX5 153 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 HCFC2Q9Y5Z7 792 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 FAM221BA6H8Z2 402 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 FFAR1O14842 300 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 BTG1P62324 171 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 FJX1Q86VR8 437 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 FBXL6Q8N531 539 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 OR51D1Q8NGF3 324 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 RLN3Q8WXF3 142 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 NECAB3Q96P71 396 aaPredicted RBP6.02□□□□□ -1.45
SMC1A-202ENST00000375340 TSSK2Q96PF2 358 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 URM1Q9BTM9 101 aaKnown RBP6.02□□□□□ -1.45
SMC1A-202ENST00000375340 PARP12Q9H0J9 701 aaKnown RBP6.02□□□□□ -1.45
SMC1A-202ENST00000375340 PTGES2Q9H7Z7 377 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 PCDHB16Q9NRJ7 776 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 EHFQ9NZC4 300 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 RAD51DO75771 328 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 SNRNP70P08621 437 aaKnown RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 GPLD1P80108 840 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 GUCA2AQ02747 115 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 MFSD13AQ14CX5 517 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 LIX1LQ8IVB5 337 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF611Q8N823 705 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 FAM3DQ96BQ1 224 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 DERL3Q96Q80 235 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 C20orf141Q9NUB4 165 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 PLEKHJ1Q9NW61 149 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 PIKFYVEQ9Y2I7 2098 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 LOC100289279A0A1B0GTE1 492 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 HMGB3O15347 200 aaKnown RBP6.01□□□□□ -1.45
SMC1A-202ENST00000375340 WNT1P04628 370 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 GZMMP51124 257 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF84P51523 738 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 PMPCAQ10713 525 aa6.01□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF169Q14929 603 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms