RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 LGALS14Q8TCE9 139 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 PCNPQ8WW12 178 aaKnown RBP11.59□□□□□ -0.55
HCFC1-202ENST00000369984 ITGB7P26010 798 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 LAP3P28838 519 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 EMC10Q5UCC4 262 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 KCTD12Q96CX2 325 aaKnown RBP11.59□□□□□ -0.55
HCFC1-202ENST00000369984 ARSGQ96EG1 525 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 LRIT2A6NDA9 550 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 IQCF3P0C7M6 154 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 SIX1Q15475 284 aaPredicted RBP11.59□□□□□ -0.55
HCFC1-202ENST00000369984 NPSR1Q6W5P4 371 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 HIST2H3AQ71DI3 136 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 KHSRPQ92945 711 aaKnown RBP eCLIP11.59□□□□□ -0.55
HCFC1-202ENST00000369984 PBX4Q9BYU1 374 aa11.59□□□□□ -0.55
HCFC1-202ENST00000369984 OR2C1O95371 312 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 RNF175Q8N4F7 328 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 FRMD1Q8N878 549 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 NRIP3Q9NQ35 241 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 EXO1Q9UQ84 846 aaKnown RBP11.58□□□□□ -0.56
HCFC1-202ENST00000369984 HSD17B6O14756 317 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 NTF3P20783 257 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 MAOBP27338 520 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 TRHRP34981 398 aaPredicted RBP11.58□□□□□ -0.56
HCFC1-202ENST00000369984 FLI1Q01543 452 aaPredicted RBP11.58□□□□□ -0.56
HCFC1-202ENST00000369984 TAGLNQ01995 201 aaKnown RBP11.58□□□□□ -0.56
HCFC1-202ENST00000369984 PRICKLE2Q7Z3G6 844 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 RTP4Q96DX8 246 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 ZNF582Q96NG8 517 aaPredicted RBP11.58□□□□□ -0.56
HCFC1-202ENST00000369984 EMC9Q9Y3B6 208 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 ENTPD2Q9Y5L3 495 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 THBS1P07996 1170 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 CNR1P21554 472 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 TRA2BP62995 288 aaKnown RBP11.58□□□□□ -0.56
HCFC1-202ENST00000369984 DSC1Q08554 894 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 RAB6CQ53S08 254 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 ZNF789Q5FWF6 425 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 APOOQ9BUR5 198 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 RAB6CQ9H0N0 254 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 DUSP22Q9NRW4 184 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 TIAM2Q8IVF5 1701 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 A0A0A6YYC8 382 aaPredicted RBP11.58□□□□□ -0.56
HCFC1-202ENST00000369984 ZCWPW2A0A1B0GU75 182 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 I3L1I5 382 aaPredicted RBP11.58□□□□□ -0.56
HCFC1-202ENST00000369984 ARHGAP33O14559 1287 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 SNRPBP14678 240 aaKnown RBP11.58□□□□□ -0.56
HCFC1-202ENST00000369984 SLC35A2P78381 396 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 GPLD1P80108 840 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 SOX4Q06945 474 aaPredicted RBP11.58□□□□□ -0.56
HCFC1-202ENST00000369984 CATR1Q13166 79 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 ADIRFQ15847 76 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 RPE65Q16518 533 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 CTSL3PQ5NE16 218 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 TP53INP2Q8IXH6 220 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 DYNLRB1Q9NP97 96 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 SCG5P05408 212 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 HTR2CP28335 458 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 EMP3P54852 163 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 SELPLGQ14242 412 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 ZNF266Q14584 549 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 OR52E1Q8NGJ3 308 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 TCTN2Q96GX1 697 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 TPSD1Q9BZJ3 242 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 SIGLEC1Q9BZZ2 1709 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 ZFP92A6NM28 416 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 ALPLP05186 524 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 OR10J4P0C629 311 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 GLB1P16278 677 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 SRPXP78539 464 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 ACSM1Q08AH1 577 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 LEXMQ3ZCV2 418 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 OR2G6Q5TZ20 316 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 KIAA1958Q8N8K9 716 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 ULBP2Q9BZM5 246 aa11.58□□□□□ -0.56
HCFC1-202ENST00000369984 TRAV20A0A0B4J274 112 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 PHF1O43189 567 aaPredicted RBP11.57□□□□□ -0.56
HCFC1-202ENST00000369984 DDAH2O95865 285 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 CRMP1Q14194 572 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 DEFB133Q30KQ1 61 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 C9orf135Q5VTT2 229 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 PCYT2Q99447 389 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 PRAMEF26H0Y7S4 382 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 DPP4P27487 766 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 SNCAP37840 140 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 GDNFP39905 211 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 ERV3-1Q14264 604 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 CLDN12P56749 244 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 ZP2Q05996 745 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 ADGRF3Q8IZF5 1079 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 EVA1AQ9H8M9 152 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 EXOSC3Q9NQT5 275 aaKnown RBP11.57□□□□□ -0.56
HCFC1-202ENST00000369984 PRAMEF4O60810 478 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 CSF2RAP15509 400 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 ITGB8P26012 769 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 CLDN2P57739 230 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 BAMBIQ13145 260 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 LPCAT3Q6P1A2 487 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 SYT17Q9BSW7 474 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 TXLNGYQ9BZA5 131 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 ARV1Q9H2C2 271 aa11.57□□□□□ -0.56
HCFC1-202ENST00000369984 PTTG3PQ9NZH4 202 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms