RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 MS4A15Q8N5U1 240 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 ELOA3Q8NG57 546 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 WNT2BQ93097 391 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 KIAA1143Q96AT1 154 aaPredicted RBP8.12□□□□□ -1.11
THBS3-201ENST00000368378 MOAP1Q96BY2 351 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 PGLYRP3Q96LB9 341 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 C1QTNF7Q9BXJ2 289 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 PITHD1Q9GZP4 211 aaPredicted RBP8.12□□□□□ -1.11
THBS3-201ENST00000368378 WDR76Q9H967 626 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 SOHLH2Q9NX45 425 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 ACTR10Q9NZ32 417 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 THAP10Q9P2Z0 257 aaPredicted RBP8.12□□□□□ -1.11
THBS3-201ENST00000368378 M0QYG6 137 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 GOSR2O14653 212 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 CDC40O60508 579 aaKnown RBP eCLIP8.12□□□□□ -1.11
THBS3-201ENST00000368378 IGHA1P01876 353 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 TRAPPC2P0DI81 140 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 TRAPPC2BP0DI82 140 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 MYF5P13349 255 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 COL9A1P20849 921 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 RBMS1P29558 406 aaKnown RBP8.12□□□□□ -1.11
THBS3-201ENST00000368378 CTXN1P60606 82 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 RPS21P63220 83 aaKnown RBP8.12□□□□□ -1.11
THBS3-201ENST00000368378 HTR4Q13639 388 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 ENPP2Q13822 863 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 Q3ZCU0 254 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 FCRL6Q6DN72 434 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 TRILQ7L0X0 811 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 MRGPREQ86SM8 312 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 ZBTB44Q8NCP5 570 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 MMABQ96EY8 250 aaPredicted RBP8.12□□□□□ -1.11
THBS3-201ENST00000368378 TOE1Q96GM8 510 aaKnown RBP8.12□□□□□ -1.11
THBS3-201ENST00000368378 SYT4Q9H2B2 425 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 SYNDIG1Q9H7V2 258 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 NIPAL2Q9H841 368 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 DLL4Q9NR61 685 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 PCOLCE2Q9UKZ9 415 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 SPACA6W5XKT8 324 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 TRAV18A0A075B6X5 111 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 A0A0G2JK05 382 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 LOC400499M0QZD8 3231 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 NUDT1P36639 197 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 MAP2K6P52564 334 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 ADPRHP54922 357 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 EEF1A1P68104 462 aaKnown RBP8.12□□□□□ -1.11
THBS3-201ENST00000368378 DEFA5Q01523 94 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 C2orf68Q2NKX9 166 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 SLC6A19Q695T7 634 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 C16orf47Q6ZP98 133 aaPredicted RBP8.12□□□□□ -1.11
THBS3-201ENST00000368378 ZNF767PQ75MW2 155 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 MFSD9Q8NBP5 474 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 NAXEQ8NCW5 288 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 RCBTB1Q8NDN9 531 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 AHCTF1Q8WYP5 2266 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 TTC9Q92623 222 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 NSMAFQ92636 917 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 TMEM106AQ96A25 262 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 ZNF764Q96H86 408 aaPredicted RBP8.12□□□□□ -1.11
THBS3-201ENST00000368378 C10orf90Q96M02 699 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 RAB11FIP5Q9BXF6 653 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.12□□□□□ -1.11
THBS3-201ENST00000368378 HRASLSQ9HDD0 168 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 ISYNA1Q9NPH2 558 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 UBQLN2Q9UHD9 624 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 CYB5R1Q9UHQ9 305 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 FBXO4Q9UKT5 387 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 SLC22A13Q9Y226 551 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 KLHDC2Q9Y2U9 406 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 SLCO1B1Q9Y6L6 691 aa8.12□□□□□ -1.11
THBS3-201ENST00000368378 PHF3Q92576 2039 aaKnown RBP8.11□□□□□ -1.11
THBS3-201ENST00000368378 DBIP07108 87 aaKnown RBP8.11□□□□□ -1.11
THBS3-201ENST00000368378 CTSEP14091 401 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 ST6GAL1P15907 406 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 SLC6A6P31641 620 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 CTHP32929 405 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 EFNB2P52799 333 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 HSF2Q03933 536 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 TNK1Q13470 666 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 CCINQ13939 588 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 ZNHIT3Q15649 155 aaPredicted RBP8.11□□□□□ -1.11
THBS3-201ENST00000368378 EIPR1Q53HC9 387 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 TMEM196Q5HYL7 178 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 TMEM205Q6UW68 189 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 CFAP77Q6ZQR2 320 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 CD163Q86VB7 1156 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 ZNF321PQ8N8H1 164 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 DUSP19Q8WTR2 217 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 GAL3ST3Q96A11 431 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 LINC00052Q96N35 136 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 ADOQ96SZ5 270 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 ZPBPQ9BS86 351 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 TRIM2Q9C040 744 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 CHST6Q9GZX3 395 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 RANBP3Q9H6Z4 567 aaPredicted RBP8.11□□□□□ -1.11
THBS3-201ENST00000368378 NCDNQ9UBB6 729 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 EXOGQ9Y2C4 368 aaKnown RBP8.11□□□□□ -1.11
THBS3-201ENST00000368378 PCDHGA5Q9Y5G8 931 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 CACNA1EQ15878 2313 aa8.11□□□□□ -1.11
THBS3-201ENST00000368378 RP1L1Q8IWN7 2480 aaPredicted RBP8.11□□□□□ -1.11
THBS3-201ENST00000368378 A0A1W2PPL8 197 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms