RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 CELA2BP08218 269 aaPredicted RBP10.64□□□□□ -0.71
SYNE1-204ENST00000367248 CD40LGP29965 261 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 IDH3GP51553 393 aaPredicted RBP10.64□□□□□ -0.71
SYNE1-204ENST00000367248 BCORP1Q8N888 145 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 SARAFQ96BY9 339 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 CNRIP1Q96F85 164 aaPredicted RBP10.64□□□□□ -0.71
SYNE1-204ENST00000367248 C1orf198Q9H425 327 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 NIPAL2Q9H841 368 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 OR2A25A4D2G3 310 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 H3BMQ9 156 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 VAMP5O95183 116 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 PET100P0DJ07 73 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 MMP11P24347 488 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 MZT1Q08AG7 82 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 COL28A1Q2UY09 1125 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 MTFR2Q6P444 385 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 H1FNTQ75WM6 255 aaPredicted RBP10.64□□□□□ -0.71
SYNE1-204ENST00000367248 DNAJC22Q8N4W6 341 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 ZNF431Q8TF32 576 aaPredicted RBP10.64□□□□□ -0.71
SYNE1-204ENST00000367248 ZPBPQ9BS86 351 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 SLC19A3Q9BZV2 496 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 RDH8Q9NYR8 311 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 V9GY05 133 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 A0A1B0GV50 99 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 HRO43593 1189 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 CA5AP35218 305 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 MRPS10P82664 201 aaKnown RBP10.64□□□□□ -0.71
SYNE1-204ENST00000367248 CFAP77Q6ZQR2 320 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 SLC43A2Q8N370 569 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 OR13C9Q8NGT0 318 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 SYT3Q9BQG1 590 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 TMA7Q9Y2S6 64 aaKnown RBP10.64□□□□□ -0.71
SYNE1-204ENST00000367248 HSPB11Q9Y547 144 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 A6NIN4 97 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 CAPNS1P04632 268 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 THBS1P07996 1170 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 OR2T7P0C7T2 308 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 MAKP20794 623 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 EPHA8P29322 1005 aaPredicted RBP10.64□□□□□ -0.71
SYNE1-204ENST00000367248 AVPR2P30518 371 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 TGM4P49221 684 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 CLDN6P56747 220 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 SLX4IPQ5VYV7 408 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 OR2T27Q8NH04 317 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 ZFAND2BQ8WV99 257 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 TXNDC15Q96J42 360 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 NIPSNAP1Q9BPW8 284 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 BCL2L10Q9HD36 194 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 A0A1B0GVC2 190 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 UPK1AO00322 258 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 ZNF195O14628 629 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 ITGB2P05107 769 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 NFYBP25208 207 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 FKBP2P26885 142 aaKnown RBP10.64□□□□□ -0.71
SYNE1-204ENST00000367248 LCN1P31025 176 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 ARRB2P32121 409 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 APOBEC1P41238 236 aaKnown RBP10.64□□□□□ -0.71
SYNE1-204ENST00000367248 GNMTQ14749 295 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 NKAIN4Q8IVV8 208 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 ANKRD53Q8N9V6 530 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 ZNF511Q8NB15 262 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 C12orf4Q9NQ89 552 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 SLC25A37Q9NYZ2 338 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 NLKQ9UBE8 527 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 ZNF814B7Z6K7 855 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 LGI1O95970 557 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 NDUFB7P17568 137 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 P2RY14Q15391 338 aa10.64□□□□□ -0.71
SYNE1-204ENST00000367248 TINAGL1Q9GZM7 467 aaPredicted RBP10.64□□□□□ -0.71
SYNE1-204ENST00000367248 SIPA1L3O60292 1781 aaPredicted RBP10.64□□□□□ -0.71
SYNE1-204ENST00000367248 COL4A1P02462 1669 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 ZNF701M0R085 212 aaPredicted RBP10.63□□□□□ -0.71
SYNE1-204ENST00000367248 RAB27BO00194 218 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 EFSO43281 561 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 KCNK2O95069 426 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 TMEM11P17152 192 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 ANKRD16Q6P6B7 361 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 RBMS3Q6XE24 437 aaKnown RBP10.63□□□□□ -0.71
SYNE1-204ENST00000367248 KIAA1551Q9HCM1 1747 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 SEMA4GQ9NTN9 838 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 PIGBOS1A0A0B4J2F0 54 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 TPPPO94811 219 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 ARSBP15848 533 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 IL2RGP31785 369 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 TCTN3Q6NUS6 607 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 C19orf48Q6RUI8 117 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 CHRNA9Q9UGM1 479 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 A0A087WV62 115 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 AGAP5A6NIR3 686 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 PPM1DO15297 605 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 ERVK-16P61578 105 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 CNIH2Q6PI25 160 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 SERPINA12Q8IW75 414 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 OR52N5Q8NH56 324 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 GPBAR1Q8TDU6 330 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 EID2BQ96D98 161 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 A0A087WUU8 490 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 OR6C76A6NM76 312 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 DNAJB6O75190 326 aa10.63□□□□□ -0.71
SYNE1-204ENST00000367248 ZNF780AO75290 641 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms