RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 C12orf49Q9H741 205 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 FXYD6-FXYD2A0A087WZ82 144 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 TCRBV5S2A0A599 114 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 D6RAR5 112 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 GLCEO94923 617 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 ABHD16AO95870 558 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 SERPINA5P05154 406 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 TNFSF4P23510 183 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 RFC3P40938 356 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 EMDP50402 254 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 PPIAP62937 165 aaKnown RBP12.69□□□□□ -0.38
CTR9-201ENST00000361367 HSF1Q00613 529 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 P2RY14Q15391 338 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 TCEAL3Q969E4 200 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 FXYD6Q9H0Q3 95 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 PSME4Q14997 1843 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 PRAMEF27A3QJZ7 478 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 OR14I1A6ND48 311 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 ASPDHA6ND91 283 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 ACOD1A6NK06 481 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 GNRHRP30968 328 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 ADARB1P78563 741 aaKnown RBP12.69□□□□□ -0.38
CTR9-201ENST00000361367 MAB21L1Q13394 359 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 SF3A2Q15428 464 aaKnown RBP12.69□□□□□ -0.38
CTR9-201ENST00000361367 PMS2CLQ68D20 193 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 RHBDD2Q6NTF9 364 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 CNIH2Q6PI25 160 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 PPP1R35Q8TAP8 253 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 AKAP1Q92667 903 aaKnown RBP eCLIP12.69□□□□□ -0.38
CTR9-201ENST00000361367 GHSRQ92847 366 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 CCDC120Q96HB5 630 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 PAPOLGQ9BWT3 736 aaKnown RBP12.69□□□□□ -0.38
CTR9-201ENST00000361367 NIPAL2Q9H841 368 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 NUDT15Q9NV35 164 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 GPR160Q9UJ42 338 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 RASD1Q9Y272 281 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 HIF3AQ9Y2N7 669 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 ZNF814B7Z6K7 855 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 GABRPO00591 440 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 NKX2-2O95096 273 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 SOD1P00441 154 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 PSMA6P60900 246 aaKnown RBP12.69□□□□□ -0.38
CTR9-201ENST00000361367 EIF5AP63241 154 aaKnown RBP12.69□□□□□ -0.38
CTR9-201ENST00000361367 ANKRD13BQ86YJ7 626 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 TSPAN10Q9H1Z9 355 aaPredicted RBP12.69□□□□□ -0.38
CTR9-201ENST00000361367 OBP2BQ9NPH6 170 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 ZNF223Q9UK11 482 aaPredicted RBP12.69□□□□□ -0.38
CTR9-201ENST00000361367 ADAM18Q9Y3Q7 739 aa12.69□□□□□ -0.38
CTR9-201ENST00000361367 TMEM212A6NML5 194 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 SNRPGP62308 76 aaKnown RBP12.68□□□□□ -0.38
CTR9-201ENST00000361367 UBE2IP63279 158 aaKnown RBP12.68□□□□□ -0.38
CTR9-201ENST00000361367 ZIC1Q15915 447 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 ACKR1Q16570 336 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 NAXDQ8IW45 347 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 MKXQ8IYA7 352 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 MRGPRX4Q96LA9 322 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 SLC19A3Q9BZV2 496 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 ZNF350Q9GZX5 532 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 FKRPQ9H9S5 495 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 COPZ2Q9P299 210 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 FBXO4Q9UKT5 387 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 COA3Q9Y2R0 106 aaPredicted RBP12.68□□□□□ -0.38
CTR9-201ENST00000361367 TEX46H3BTG2 121 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 PRH1P02810 166 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 TFAP2AP05549 437 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 IGFBP1P08833 259 aaPredicted RBP12.68□□□□□ -0.38
CTR9-201ENST00000361367 DBHP09172 617 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 ATP1B3P54709 279 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 STARD6P59095 220 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 SYT14P1Q58G82 188 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 SLC35D3Q5M8T2 416 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 KIRREL2Q6UWL6 708 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 SERPINA12Q8IW75 414 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 IL17RDQ8NFM7 739 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 RPL3LQ92901 407 aaKnown RBP12.68□□□□□ -0.38
CTR9-201ENST00000361367 FOXRED1Q96CU9 486 aaPredicted RBP12.68□□□□□ -0.38
CTR9-201ENST00000361367 DUS3LQ96G46 650 aaKnown RBP12.68□□□□□ -0.38
CTR9-201ENST00000361367 MFRPQ9BY79 579 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 ERVMER34-1Q9H9K5 563 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 IGHA2P01877 340 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 AMY2AP04746 511 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 FCGR2AP12318 317 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 LSAMPQ13449 338 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 WDR74Q6RFH5 385 aaPredicted RBP12.68□□□□□ -0.38
CTR9-201ENST00000361367 MOB3CQ70IA8 216 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 GDPD1Q8N9F7 314 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 OR13C9Q8NGT0 318 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 TMEM106AQ96A25 262 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 SARAFQ96BY9 339 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 CCDC32Q9BV29 185 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 OR10A4Q9H209 315 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 DYNLRB1Q9NP97 96 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 PLEKHJ1Q9NW61 149 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 RABL2AQ9UBK7 228 aaPredicted RBP12.68□□□□□ -0.38
CTR9-201ENST00000361367 RABL2BQ9UNT1 228 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 RBMX2Q9Y388 322 aaKnown RBP12.68□□□□□ -0.38
CTR9-201ENST00000361367 PCDHGA10Q9Y5H3 936 aa12.68□□□□□ -0.38
CTR9-201ENST00000361367 OR2AT4A6NND4 320 aa12.67□□□□□ -0.38
CTR9-201ENST00000361367 CXCL13O43927 109 aa12.67□□□□□ -0.38
CTR9-201ENST00000361367 ABCD3P28288 659 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms