RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 FADS1O60427 444 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 RCBTB2O95199 551 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 HPP00738 406 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 FBXW4P57775 412 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 P2RY14Q15391 338 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 TGIF1Q15583 401 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 YIF1BQ5BJH7 314 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 ZNF57Q68EA5 555 aaPredicted RBP11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 WBP2NLQ6ICG8 309 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 BBS1Q8NFJ9 593 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 OR51G2Q8NGK0 314 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 ZNF563Q8TA94 476 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 UBL7Q96S82 380 aaPredicted RBP11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 KCNJ15Q99712 375 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 PRSS27Q9BQR3 290 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 MARVELD1Q9BSK0 173 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 TRAF4Q9BUZ4 470 aaPredicted RBP11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 NIPAL2Q9H841 368 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 ASCL3Q9NQ33 180 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 TRIM36Q9NQ86 728 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 RPRD1BQ9NQG5 326 aaKnown RBP11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 IL17BQ9UHF5 180 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 MED31Q9Y3C7 131 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 A0A0B4J293 547 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 DAPL1A0PJW8 107 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 C12orf71A8MTZ7 269 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 J3QRE1 110 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 PIP5K1CO60331 668 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 NCR1O76036 304 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 PTNP21246 168 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 ITPKBP27987 946 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 RBM34P42696 430 aaKnown RBP11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 CAPZA2P47755 286 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 Q0VFX4 171 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 MADCAM1Q13477 382 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 PLBD1Q6P4A8 553 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 CBLN3Q6UW01 205 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 LYPD8Q6UX82 237 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 LRRC28Q86X40 367 aaPredicted RBP11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 PLCZ1Q86YW0 608 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 NKD1Q969G9 470 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 ZNF524Q96C55 264 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 RASL10BQ96S79 203 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 RNF32Q9H0A6 362 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 OR52D1Q9H346 318 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 RYDENQ9NUL5 291 aaKnown RBP11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 NLKQ9UBE8 527 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 FBXL4Q9UKA2 621 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 TMEM5Q9Y2B1 443 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 ALG5Q9Y673 324 aa11.94□□□□□ -0.5
SQSTM1-201ENST00000360718 ZFHX4Q86UP3 3567 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 ITGA10O75578 1167 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 LYPD3O95274 346 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 SLC2A10O95528 541 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 NUDT14O95848 222 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 FAPQ12884 760 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 IDNKQ5T6J7 187 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 HBMQ6B0K9 141 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 FCRLBQ6BAA4 426 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 NIPAL3Q6P499 406 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 OPN5Q6U736 354 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 WDR88Q6ZMY6 472 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 TMEM91Q6ZNR0 172 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 TMPRSS7Q7RTY8 843 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 TPRA1Q86W33 373 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 GPALPP1Q8IXQ4 340 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 YIPF7Q8N8F6 280 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 SPACA9Q96E40 222 aaPredicted RBP11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 DCLRE1CQ96SD1 692 aaKnown RBP11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 ALG8Q9BVK2 526 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 HDHD2Q9H0R4 259 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 P4HTMQ9NXG6 502 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 EXTL2Q9UBQ6 330 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 SLC22A31A6NKX4 558 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 CDC42EP2O14613 210 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 TP53I11O14683 189 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 MT-ND5P03915 603 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 FBXO45P0C2W1 286 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 PGCP20142 388 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 TAS2R43P59537 309 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 ZNF117Q03924 483 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 C17orf67Q0P5P2 114 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 GALEQ14376 348 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 SMARCD3Q6STE5 483 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 RPS19BP1Q86WX3 136 aaKnown RBP11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 DTX1Q86Y01 620 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 SIRT6Q8N6T7 355 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 FANK1Q8TC84 345 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 ZFAND1Q8TCF1 268 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 CREB3L1Q96BA8 519 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 IP6K3Q96PC2 410 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 CCNL2Q96S94 520 aaPredicted RBP11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 B3GAT2Q9NPZ5 323 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 SDHAF3Q9NRP4 125 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 KLRF1Q9NZS2 232 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 IL20RAQ9UHF4 553 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 BOLA1Q9Y3E2 137 aa11.93□□□□□ -0.5
SQSTM1-201ENST00000360718 CFAP47Q6ZTR5 3102 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 LOC400499M0QZD8 3231 aa11.92□□□□□ -0.5
SQSTM1-201ENST00000360718 SHISA3A0PJX4 238 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms