RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 TMEM225Q6GV28 225 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 MEPCEQ7L2J0 689 aaKnown RBP13.97□□□□□ -0.17
CTSA-202ENST00000354880 UBQLNLQ8IYU4 475 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 ARIH2OSQ8N7S6 290 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 RNFT2Q96EX2 444 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 DDOQ99489 341 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 VCX3AQ9NNX9 186 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 MRPS18AQ9NVS2 196 aaKnown RBP13.97□□□□□ -0.17
CTSA-202ENST00000354880 B3GAT1Q9P2W7 334 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 PCDHGB1Q9Y5G3 927 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 PTPRQQ9UMZ3 2332 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 DNAJC13O75165 2243 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 NPIPB13A6NJU9 1138 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 SLC22A31A6NKX4 558 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 ZNF814B7Z6K7 855 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 NPIPB4C9JG80 1138 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 DNPH1O43598 174 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 CLUP10909 449 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 SLC2A5P22732 501 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 ACVR1BP36896 505 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 DAP3P51398 398 aaKnown RBP13.97□□□□□ -0.17
CTSA-202ENST00000354880 SUCLG1P53597 346 aaKnown RBP13.97□□□□□ -0.17
CTSA-202ENST00000354880 RAC3P60763 192 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 HSF1Q00613 529 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 PMP22Q01453 160 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 RAB40BQ12829 278 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 KLHL22Q53GT1 634 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 RNFT1Q5M7Z0 435 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 HBMQ6B0K9 141 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 ADCK1Q86TW2 530 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 GHDCQ8N2G8 530 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 OR9Q1Q8NGQ5 310 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 ZNF519Q8TB69 540 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 ZPLD1Q8TCW7 415 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 ADGRG7Q96K78 797 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 NAA11Q9BSU3 229 aaPredicted RBP13.97□□□□□ -0.17
CTSA-202ENST00000354880 MFRPQ9BY79 579 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 ZDHHC11Q9H8X9 412 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 PCDHGB7Q9Y5F8 929 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 NOX1Q9Y5S8 564 aa13.97□□□□□ -0.17
CTSA-202ENST00000354880 BSNQ9UPA5 3926 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 CACNA1GO43497 2377 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 IRGMA1A4Y4 181 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 DPPA5A6NC42 116 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 NPIPA5E9PKD4 350 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 ARHGEF9O43307 516 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 BCL10O95999 233 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 GYPBP06028 91 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 IFNGR1P15260 489 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 PCMT1P22061 227 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 LHX2P50458 406 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 SLC16A1P53985 500 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 CARD18P57730 90 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 RPS7P62081 194 aaKnown RBP13.96□□□□□ -0.17
CTSA-202ENST00000354880 EMX1Q04741 257 aaPredicted RBP13.96□□□□□ -0.17
CTSA-202ENST00000354880 DBPQ10586 325 aaPredicted RBP13.96□□□□□ -0.17
CTSA-202ENST00000354880 TMED1Q13445 227 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 MELKQ14680 651 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 ZNF169Q14929 603 aaPredicted RBP13.96□□□□□ -0.17
CTSA-202ENST00000354880 NEDD8Q15843 81 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 GTF2IRD2BQ6EKJ0 949 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 XAF1Q6GPH4 301 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 SLC35D2Q76EJ3 337 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 TRILQ7L0X0 811 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 GPAT4Q86UL3 456 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 GTF2IRD2Q86UP8 949 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 UEVLDQ8IX04 471 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 SVOPQ8N4V2 548 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 OR2V1Q8NHB1 315 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 LGALS12Q96DT0 336 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 ZHX1-C8orf76Q96EF9 292 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 TMEM80Q96HE8 168 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 OXGR1Q96P68 337 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 TEAD3Q99594 435 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 NMNAT2Q9BZQ4 307 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 WARS2Q9UGM6 360 aaKnown RBP13.96□□□□□ -0.17
CTSA-202ENST00000354880 NPIPA1Q9UND3 350 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 COMMD3-BMI1R4GMX3 469 aa13.96□□□□□ -0.17
CTSA-202ENST00000354880 KIAA1549Q9HCM3 1950 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 LOC102725191A0A1B0GVB3 256 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 FADS2O95864 444 aaKnown RBP13.95□□□□□ -0.18
CTSA-202ENST00000354880 RENP00797 406 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 PDGFAP04085 211 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 ZNF24P17028 368 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 KLK2P20151 261 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 ALDH3B2P48448 385 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 AGFG1P52594 562 aaKnown RBP13.95□□□□□ -0.18
CTSA-202ENST00000354880 CLDN15P56746 228 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 TBR1Q16650 682 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 NADK2Q4G0N4 442 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 PDSS1Q5T2R2 415 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 ARMC4Q5T2S8 1044 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 ASB18Q6ZVZ8 466 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 OR52I1Q8NGK6 324 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 OR10D3Q8NH80 312 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 KISS1RQ969F8 398 aaPredicted RBP13.95□□□□□ -0.18
CTSA-202ENST00000354880 ABTB1Q969K4 478 aaPredicted RBP13.95□□□□□ -0.18
CTSA-202ENST00000354880 SNX18Q96RF0 628 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 SRXN1Q9BYN0 137 aa13.95□□□□□ -0.18
CTSA-202ENST00000354880 DEFB127Q9H1M4 99 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms