RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 AGR2O95994 175 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 ADRB1P08588 477 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 PEPDP12955 493 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 CD59P13987 128 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF28P17035 718 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 RAG2P55895 527 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 PITPNAQ00169 270 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 PSG6Q00889 435 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 PLAURQ03405 335 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 HSF2Q03933 536 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 GRK1Q15835 563 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 CDONQ4KMG0 1287 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 EIPR1Q53HC9 387 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 BTN2A1Q7KYR7 527 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 KMT5CQ86Y97 462 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 SPERTQ8NA61 448 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 PTPMT1Q8WUK0 201 aaPredicted RBP7.83□□□□□ -1.16
TRIM55-204ENST00000353317 RBP7Q96R05 134 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 LMF1Q96S06 567 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 DPYSL5Q9BPU6 564 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 ZCCHC4Q9H5U6 513 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 NKIRAS2Q9NYR9 191 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 SERTAD3Q9UJW9 196 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 AK6Q9Y3D8 172 aaKnown RBP7.83□□□□□ -1.16
TRIM55-204ENST00000353317 LOC400499M0QZD8 3231 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 IGKV3D-11A0A0A0MRZ8 115 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 TRAV1-2A0A0B4J238 106 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.83□□□□□ -1.16
TRIM55-204ENST00000353317 A0A1B0GVI7 797 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 D6RAR5 112 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 YKT6O15498 198 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 GMDSO60547 372 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 PPP1R3DO95685 299 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 IGKV1D-16P01601 117 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 NID1P14543 1247 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 RPS4Y1P22090 263 aaKnown RBP7.83□□□□□ -1.16
TRIM55-204ENST00000353317 SELENOPP49908 381 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 RPS11P62280 158 aaKnown RBP eCLIP7.83□□□□□ -1.16
TRIM55-204ENST00000353317 PUDPQ08623 228 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 STX4Q12846 297 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF267Q14586 743 aaPredicted RBP7.83□□□□□ -1.16
TRIM55-204ENST00000353317 NNATQ16517 81 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 TP53I3Q53FA7 332 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 TMEM255AQ5JRV8 349 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 PHF19Q5T6S3 580 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 FGD2Q7Z6J4 655 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 CMIPQ8IY22 773 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF595Q8IYB9 648 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF527Q8NB42 609 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 OR2T35Q8NGX2 323 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 OR56B4Q8NH76 319 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 LRRC20Q8TCA0 184 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 RHBDD1Q8TEB9 315 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 GCDHQ92947 438 aaPredicted RBP7.83□□□□□ -1.16
TRIM55-204ENST00000353317 RIT1Q92963 219 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 NXPE2Q96DL1 559 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 OMA1Q96E52 524 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 PTCHD1Q96NR3 888 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 C20orf85Q9H1P6 137 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 METTL17Q9H7H0 456 aaPredicted RBP7.83□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF304Q9HCX3 659 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 COQ3Q9NZJ6 369 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 MRPL15Q9P015 296 aaKnown RBP7.83□□□□□ -1.16
TRIM55-204ENST00000353317 ABRACLQ9P1F3 81 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 NUP50Q9UKX7 468 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 FLVCR2Q9UPI3 526 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 SATB2Q9UPW6 733 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 SPACA6W5XKT8 324 aa7.83□□□□□ -1.16
TRIM55-204ENST00000353317 A0A087WV62 115 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 TEX51A0A1B0GUA7 166 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 RIIAD1A6NNX1 92 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 TOX3O15405 576 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 FLRT2O43155 660 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 PTP4A3O75365 173 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 STX11O75558 287 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 TFP02787 698 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF3P17036 446 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 GDNFP39905 211 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 PGDP52209 483 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 ZFP36L1Q07352 338 aaKnown RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 CRYZQ08257 329 aaKnown RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 ZSWIM7Q19AV6 140 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 HSD17B12Q53GQ0 312 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 CLLU1Q5K131 121 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 DCST2Q5T1A1 773 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 SLC22A10Q63ZE4 541 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF385CQ66K41 422 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 RPL13AP3Q6NVV1 102 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 FIGNL1Q6PIW4 674 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 SEZ6L2Q6UXD5 910 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 NPSR1Q6W5P4 371 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 LANCL3Q6ZV70 420 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 RABEPKQ7Z6M1 372 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 COMMD7Q86VX2 200 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 CDK20Q8IZL9 346 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 ZNF619Q8N2I2 560 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.82□□□□□ -1.16
TRIM55-204ENST00000353317 OR11G2Q8NGC1 345 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 GRHL3Q8TE85 626 aa7.82□□□□□ -1.16
TRIM55-204ENST00000353317 SMIM4Q8WVI0 70 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms