RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 EXPH5Q8NEV8 1989 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 WDR87Q6ZQQ6 2873 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 A0A0G2JK05 382 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 TMEM200CA6NKL6 621 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 C11orf98E9PRG8 122 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 XKRYO14609 159 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 ARHGEF9O43307 516 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 ZNF354AO60765 605 aaPredicted RBP15.1■□□□□ 0.01
SAMM50-201ENST00000350028 OR6A2O95222 327 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 PRKCAP17252 672 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 GRPRP30550 384 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 THBS2P35442 1172 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 PSMB10P40306 273 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 DLX5P56178 289 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 RPL27P61353 136 aaKnown RBP15.1■□□□□ 0.01
SAMM50-201ENST00000350028 IL18Q14116 193 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 FAM220AQ7Z4H9 259 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 NRARPQ7Z6K4 114 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 LRRC28Q86X40 367 aaPredicted RBP15.1■□□□□ 0.01
SAMM50-201ENST00000350028 OR6V1Q8N148 313 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 OR13C5Q8NGS8 318 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 OR2I1PQ8NGU4 316 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 THAP3Q8WTV1 239 aaPredicted RBP15.1■□□□□ 0.01
SAMM50-201ENST00000350028 KLHL15Q96M94 604 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 MESP1Q9BRJ9 268 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 SLC22A4Q9H015 551 aa15.1■□□□□ 0.01
SAMM50-201ENST00000350028 NXT1Q9UKK6 140 aaKnown RBP15.1■□□□□ 0.01
SAMM50-201ENST00000350028 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 NTN3O00634 580 aaPredicted RBP15.09■□□□□ 0.01
SAMM50-201ENST00000350028 WISP1O95388 367 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 IGHMP01871 453 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 HLA-DQB1P01920 261 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 SLC2A2P11168 524 aaPredicted RBP15.09■□□□□ 0.01
SAMM50-201ENST00000350028 MSX1P28360 303 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 APOBEC1P41238 236 aaKnown RBP15.09■□□□□ 0.01
SAMM50-201ENST00000350028 RFX2P48378 723 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 CENPAP49450 140 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 TMED10P49755 219 aaKnown RBP15.09■□□□□ 0.01
SAMM50-201ENST00000350028 RPS11P62280 158 aaKnown RBP eCLIP15.09■□□□□ 0.01
SAMM50-201ENST00000350028 LCN10Q6JVE6 187 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 IL17RDQ8NFM7 739 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 HPS1Q92902 700 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 TXNIPQ9H3M7 391 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 ZCCHC4Q9H5U6 513 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 CCDC86Q9H6F5 360 aaKnown RBP15.09■□□□□ 0.01
SAMM50-201ENST00000350028 WDR76Q9H967 626 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 WDR54Q9H977 334 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 CYSLTR2Q9NS75 346 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 MRPL39Q9NYK5 338 aaKnown RBP15.09■□□□□ 0.01
SAMM50-201ENST00000350028 RASD1Q9Y272 281 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 FKBP7Q9Y680 259 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 TMEM14AQ9Y6G1 99 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 NOTOA8MTQ0 251 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 PATE3B3GLJ2 98 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 ZNF879B4DU55 563 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 D6RAR5 112 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 H7C1C5 153 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 DCTN6O00399 190 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 PLPP3O14495 311 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 PHYHO14832 338 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 SSX4O60224 188 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 SYPP08247 313 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 ELK1P19419 428 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 BLVRAP53004 296 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 OR10A3P58181 314 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 LCN6P62502 163 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 MFSD13AQ14CX5 517 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 TAB1Q15750 504 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 TRIQKQ629K1 86 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 SLC23A3Q6PIS1 610 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 Q8N402 240 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 CELF2-AS1Q8N7Q2 184 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 AGBL5Q8NDL9 886 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 C19orf18Q8NEA5 215 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 ZNF519Q8TB69 540 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 SLC22A8Q8TCC7 542 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 INTS14Q96SY0 518 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.09■□□□□ 0.01
SAMM50-201ENST00000350028 SYT4Q9H2B2 425 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 SDHAF3Q9NRP4 125 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 EXTL2Q9UBQ6 330 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 GPN3Q9UHW5 284 aaPredicted RBP15.09■□□□□ 0.01
SAMM50-201ENST00000350028 ZNF281Q9Y2X9 895 aa15.09■□□□□ 0.01
SAMM50-201ENST00000350028 PCNX3Q9H6A9 2034 aa15.08■□□□□ 0.01
SAMM50-201ENST00000350028 ANKRD61A6NGH8 418 aa15.08■□□□□ 0
SAMM50-201ENST00000350028 HSPB2A8KAH6 182 aa15.08■□□□□ 0
SAMM50-201ENST00000350028 FLRT2O43155 660 aa15.08■□□□□ 0
SAMM50-201ENST00000350028 KRT8P05787 483 aa15.08■□□□□ 0
SAMM50-201ENST00000350028 NPR2P20594 1047 aa15.08■□□□□ 0
SAMM50-201ENST00000350028 AHCYP23526 432 aa15.08■□□□□ 0
SAMM50-201ENST00000350028 TALDO1P37837 337 aa15.08■□□□□ 0
SAMM50-201ENST00000350028 EGR3Q06889 387 aa15.08■□□□□ 0
SAMM50-201ENST00000350028 ZP4Q12836 540 aa15.08■□□□□ 0
SAMM50-201ENST00000350028 HSPB2Q16082 182 aa15.08■□□□□ 0
SAMM50-201ENST00000350028 ACKR1Q16570 336 aa15.08■□□□□ 0
SAMM50-201ENST00000350028 HSD17B12Q53GQ0 312 aa15.08■□□□□ 0
SAMM50-201ENST00000350028 YIF1BQ5BJH7 314 aa15.08■□□□□ 0
SAMM50-201ENST00000350028 TRIM61Q5EBN2 209 aa15.08■□□□□ 0
SAMM50-201ENST00000350028 SPATC1Q76KD6 591 aa15.08■□□□□ 0
SAMM50-201ENST00000350028 RAB43Q86YS6 212 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms