RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 MITD1Q8WV92 249 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 TAAR5O14804 337 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 TEAD1P28347 426 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 ZNF280AP59817 542 aaPredicted RBP11.21□□□□□ -0.62
COL12A1-202ENST00000345356 HLXQ14774 488 aaPredicted RBP11.21□□□□□ -0.62
COL12A1-202ENST00000345356 TMEM182Q6ZP80 229 aaPredicted RBP11.21□□□□□ -0.62
COL12A1-202ENST00000345356 GDF7Q7Z4P5 450 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 TMEM217Q8N7C4 229 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 PLPP7Q8NBV4 271 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 OR2G3Q8NGZ4 309 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 OLIG1Q8TAK6 271 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 RHOFQ9HBH0 211 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 DLL4Q9NR61 685 aa11.21□□□□□ -0.62
COL12A1-202ENST00000345356 OTOL1A6NHN0 477 aaPredicted RBP11.2□□□□□ -0.62
COL12A1-202ENST00000345356 H3BQ06 376 aaPredicted RBP11.2□□□□□ -0.62
COL12A1-202ENST00000345356 CALCRP30988 508 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 TESK1Q15569 626 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 GLYR1Q49A26 553 aaPredicted RBP11.2□□□□□ -0.62
COL12A1-202ENST00000345356 TP53I13Q8NBR0 393 aaPredicted RBP11.2□□□□□ -0.62
COL12A1-202ENST00000345356 ARHGAP9Q9BRR9 750 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 PRO1933Q9H354 126 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 VSTM2BA6NLU5 285 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 APOA2P02652 100 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 NAGAP17050 411 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 CTRB1P17538 263 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 CTSCP53634 463 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 TEAD2Q15562 447 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 CTRB2Q6GPI1 263 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 CD300LGQ6UXG3 332 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 DBX2Q6ZNG2 339 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 LRRTM1Q86UE6 522 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 TTC9BQ8N6N2 239 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 LMNTD1Q8N9Z9 388 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 UBAC2Q8NBM4 344 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 OR56B1Q8NGI3 324 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 BMFQ96LC9 184 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 SERINC2Q96SA4 455 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 GPR62Q9BZJ7 368 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 SLC39A9Q9NUM3 307 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 MED1Q15648 1581 aaPredicted RBP11.2□□□□□ -0.62
COL12A1-202ENST00000345356 DSCR3O14972 297 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 JTBO76095 146 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 SFTA3P0C7M3 94 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 DCTDP32321 178 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 ARRB1P49407 418 aaPredicted RBP11.2□□□□□ -0.62
COL12A1-202ENST00000345356 TAF9Q16594 264 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 ST3GAL2Q16842 350 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 Q3ZCU0 254 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 ADGRE4PQ86SQ3 457 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 TTC9Q92623 222 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 TMEM59Q9BXS4 323 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 NXF5Q9H1B4 397 aaKnown RBP11.2□□□□□ -0.62
COL12A1-202ENST00000345356 GPR55Q9Y2T6 319 aaPredicted RBP11.2□□□□□ -0.62
COL12A1-202ENST00000345356 FITM1A5D6W6 292 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 BTBD17A6NE02 478 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 F5H5K5 113 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 H7C1C5 153 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 SOD1P00441 154 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 OR4E1P0C645 316 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 RAC2P15153 192 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 LCN6P62502 163 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 GABRG1Q8N1C3 465 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 OR5M1Q8NGP8 315 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 OR14L1PQ8NHC6 308 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 PEX11GQ96HA9 241 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 AKR1E2Q96JD6 320 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 CMSS1Q9BQ75 279 aaKnown RBP11.2□□□□□ -0.62
COL12A1-202ENST00000345356 ULBP3Q9BZM4 244 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 ZNF160Q9HCG1 818 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 DKKL1Q9UK85 242 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 A6NIZ1 184 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 ZNF354AO60765 605 aaPredicted RBP11.2□□□□□ -0.62
COL12A1-202ENST00000345356 RFX2P48378 723 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 RAP1BP61224 184 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 RAB31Q13636 194 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 HAGHQ16775 308 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 FAM58AQ8N1B3 248 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 SCMH1Q96GD3 660 aa11.2□□□□□ -0.62
COL12A1-202ENST00000345356 MDFIC2A0A1B0GVS7 189 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 NUDT21O43809 227 aaKnown RBP11.19□□□□□ -0.62
COL12A1-202ENST00000345356 C1orf105O95561 183 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 H2AFB1P0C5Y9 115 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 ZNF808Q8N4W9 903 aaPredicted RBP11.19□□□□□ -0.62
COL12A1-202ENST00000345356 KIAA1958Q8N8K9 716 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 RCBTB1Q8NDN9 531 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 OR13C5Q8NGS8 318 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 THAP3Q8WTV1 239 aaPredicted RBP11.19□□□□□ -0.62
COL12A1-202ENST00000345356 TEAD3Q99594 435 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 NCDNQ9UBB6 729 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 CITO14578 2027 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 KDM4EB2RXH2 506 aaPredicted RBP11.19□□□□□ -0.62
COL12A1-202ENST00000345356 CLEC3AO75596 197 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 TSPAN12O95859 305 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 HLA-HP01893 362 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 FABP4P15090 132 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 HIST1H1TP22492 207 aaPredicted RBP11.19□□□□□ -0.62
COL12A1-202ENST00000345356 PAX6P26367 422 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 BMPR1AP36894 532 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 F2RL1P55085 397 aa11.19□□□□□ -0.62
COL12A1-202ENST00000345356 SNRPNP63162 240 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms