RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 ACOD1A6NK06 481 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 MASP1P48740 699 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 HBA1P69905 142 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 OR5M10Q6IEU7 315 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 CNKSR3Q6P9H4 555 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 OPN5Q6U736 354 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 TAS1R3Q7RTX0 852 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 HSD17B11Q8NBQ5 300 aa12.68□□□□□ -0.38
TRIO-202ENST00000344204 PATJQ8NI35 1801 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 PCMT1P22061 227 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 FABP5Q01469 135 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 PCK2Q16822 640 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 Q6ZRG5 221 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 OR1S2Q8NGQ3 325 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 PCYT2Q99447 389 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 SPICQ8N5J4 248 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 LTB4R2Q9NPC1 389 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 CA14Q9ULX7 337 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 PLXND1Q9Y4D7 1925 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 OR6C68A6NDL8 312 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 TCF21O43680 179 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 ZNF30P17039 623 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 ACSM1Q08AH1 577 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 SLC35D2Q76EJ3 337 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 NICN1Q9BSH3 213 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 DMRT3Q9NQL9 472 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 SERTAD4Q9NUC0 356 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 FAM183AA6NL82 134 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 TBX18O95935 607 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 PRSS45Q7RTY3 260 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 ZNF440Q8IYI8 595 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 UBXN10Q96LJ8 280 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 WDR83Q9BRX9 315 aaKnown RBP12.67□□□□□ -0.38
TRIO-202ENST00000344204 TMEM121BQ9BXQ6 578 aaPredicted RBP12.67□□□□□ -0.38
TRIO-202ENST00000344204 HNF4GQ14541 408 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 BAP18Q8IXM2 172 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 HHLA1C9JL84 531 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 SMIM4Q8WVI0 70 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 ZNF286AQ9HBT8 521 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 ZFP92A6NM28 416 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 PDHXO00330 501 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 OR2T7P0C7T2 308 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 RAG2P55895 527 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 OR2T27Q8NH04 317 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 SIRT7Q9NRC8 400 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 ZNF646O15015 1829 aaPredicted RBP12.67□□□□□ -0.38
TRIO-202ENST00000344204 TMPRSS9Q7Z410 1059 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 ADGRE4PQ86SQ3 457 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 SDSLQ96GA7 329 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 MTHFD2LQ9H903 347 aaPredicted RBP12.67□□□□□ -0.38
TRIO-202ENST00000344204 KDM4FA0A1W2PPD8 638 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 ACP5P13686 325 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 CR2P20023 1033 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 POLR2GP62487 172 aaKnown RBP eCLIP12.67□□□□□ -0.38
TRIO-202ENST00000344204 NXPE4Q6UWF7 544 aa12.67□□□□□ -0.38
TRIO-202ENST00000344204 CNOT1A5YKK6 2376 aaKnown RBP12.66□□□□□ -0.38
TRIO-202ENST00000344204 IL5P05113 134 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 SERPINE2P07093 398 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 BIDP55957 195 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 TSPAN31Q12999 210 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 PDGFRLQ15198 375 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 AK3Q9UIJ7 227 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 MGST1P10620 155 aaKnown RBP12.66□□□□□ -0.38
TRIO-202ENST00000344204 HLA-DOBP13765 273 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 OR1D2P34982 312 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 LCN6P62502 163 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 RAB35Q15286 201 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 GLDNQ6ZMI3 551 aaPredicted RBP12.66□□□□□ -0.38
TRIO-202ENST00000344204 ARFGAP1Q8N6T3 406 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 INTS12Q96CB8 462 aaKnown RBP12.66□□□□□ -0.38
TRIO-202ENST00000344204 GCM1Q9NP62 436 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 GPR173Q9NS66 373 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 CSTAP01040 98 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 SERPINA5P05154 406 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 OR4Q2P0C623 313 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 IAH1Q2TAA2 248 aaPredicted RBP12.66□□□□□ -0.38
TRIO-202ENST00000344204 TPRG1Q6ZUI0 275 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 TVP23CQ96ET8 276 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 OR13C5Q8NGS8 318 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 SMOQ99835 787 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 GDF2Q9UK05 429 aaPredicted RBP12.66□□□□□ -0.38
TRIO-202ENST00000344204 SPATA31A5Q5VU36 1347 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 SPATA31A7Q8IWB4 1347 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 CEBPZOSA8MTT3 80 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 HIDE1A8MVS5 230 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 MTHFD2P13995 350 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 PGAM5Q96HS1 289 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 WWTR1Q9GZV5 400 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 TICRRQ7Z2Z1 1910 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 ZNF140P52738 457 aaPredicted RBP12.66□□□□□ -0.38
TRIO-202ENST00000344204 ZNF280AP59817 542 aaPredicted RBP12.66□□□□□ -0.38
TRIO-202ENST00000344204 ST3GAL2Q16842 350 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 PSAPL1Q6NUJ1 521 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 PNPLA2Q96AD5 504 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 ZNF724A8MTY0 619 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 NAGAP17050 411 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 DVL1P1P54792 670 aaPredicted RBP12.66□□□□□ -0.38
TRIO-202ENST00000344204 ETV3LQ6ZN32 361 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 TEPSINQ96N21 525 aa12.66□□□□□ -0.38
TRIO-202ENST00000344204 SERINC1Q9NRX5 453 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms