RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 FRMD6-AS1P0C7T7 363 aa9.01□□□□□ -0.97
ATXN3-201ENST00000340660 RPS2P15880 293 aaKnown RBP9.01□□□□□ -0.97
ATXN3-201ENST00000340660 ZNF26P17031 533 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-201ENST00000340660 ZNF37AP17032 561 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-201ENST00000340660 CTNNA1P35221 906 aaKnown RBP9.01□□□□□ -0.97
ATXN3-201ENST00000340660 ALDH9A1P49189 494 aa9.01□□□□□ -0.97
ATXN3-201ENST00000340660 ZNF81P51508 661 aa9.01□□□□□ -0.97
ATXN3-201ENST00000340660 MAPK12P53778 367 aa9.01□□□□□ -0.97
ATXN3-201ENST00000340660 ARF1P84077 181 aaKnown RBP9.01□□□□□ -0.97
ATXN3-201ENST00000340660 QPRTQ15274 297 aa9.01□□□□□ -0.97
ATXN3-201ENST00000340660 CCNYL2Q5T2Q4 361 aa9.01□□□□□ -0.97
ATXN3-201ENST00000340660 CRIP3Q6Q6R5 217 aa9.01□□□□□ -0.97
ATXN3-201ENST00000340660 PIWIL3Q7Z3Z3 882 aaKnown RBP9.01□□□□□ -0.97
ATXN3-201ENST00000340660 LMNTD2Q8IXW0 634 aa9.01□□□□□ -0.97
ATXN3-201ENST00000340660 SYNPRQ8TBG9 265 aa9.01□□□□□ -0.97
ATXN3-201ENST00000340660 TM4SF18Q96CE8 201 aa9.01□□□□□ -0.97
ATXN3-201ENST00000340660 RCE1Q9Y256 329 aa9.01□□□□□ -0.97
ATXN3-201ENST00000340660 DNAH17Q9UFH2 4485 aa9.01□□□□□ -0.97
ATXN3-201ENST00000340660 SRRM2Q9UQ35 2752 aaKnown RBP9.01□□□□□ -0.97
ATXN3-201ENST00000340660 TCRBV7S3A2A0A539 114 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 TCRBV7S2A1N4TA0A589 114 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 SLC22A23A1A5C7 686 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 AP3B1O00203 1094 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 SEMA3DO95025 777 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 AHSGP02765 367 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 STIP1P31948 543 aaKnown RBP9□□□□□ -0.97
ATXN3-201ENST00000340660 MDH2P40926 338 aaKnown RBP9□□□□□ -0.97
ATXN3-201ENST00000340660 CAPZA2P47755 286 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 SELENOPP49908 381 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 SUMO3P55854 103 aaPredicted RBP9□□□□□ -0.97
ATXN3-201ENST00000340660 SELENOVP59797 346 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 TRAF3Q13114 568 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 CCDC121Q6ZUS5 278 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 ADAMTSL2Q86TH1 951 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 TCAIMQ8N3R3 496 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 ZNF283Q8N7M2 679 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 PHOSPHO1Q8TCT1 267 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 CALML6Q8TD86 181 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 MAELQ96JY0 434 aaKnown RBP9□□□□□ -0.97
ATXN3-201ENST00000340660 WDFY2Q96P53 400 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 MRPL1Q9BYD6 325 aaKnown RBP9□□□□□ -0.97
ATXN3-201ENST00000340660 SENP1Q9P0U3 644 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 CTNNAL1Q9UBT7 734 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 SLC7A8Q9UHI5 535 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 MAB21L2Q9Y586 359 aa9□□□□□ -0.97
ATXN3-201ENST00000340660 DNPH1O43598 174 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 HLA-HP01893 362 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 QDPRP09417 244 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 TFPIP10646 304 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 HPGDP15428 266 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 SH3BGRP55822 239 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-201ENST00000340660 ROR2Q01974 943 aaKnown RBP8.99□□□□□ -0.97
ATXN3-201ENST00000340660 GALNT1Q10472 559 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-201ENST00000340660 PDE7AQ13946 482 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 ZNF460Q14592 562 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 LY6EQ16553 131 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 CCNG2Q16589 344 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 TMEM255AQ5JRV8 349 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 PRAMEF8Q5VWM4 474 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 PRAMEF7Q5VXH5 474 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 C11orf63Q6NUN7 778 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 PPIL6Q8IXY8 311 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 SCAIQ8N9R8 606 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 ANKRD49Q8WVL7 239 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 OR5M11Q96RB7 305 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 DCTN5Q9BTE1 182 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 KRTAP3-1Q9BYR8 98 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 TSGA10Q9BZW7 698 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 XAB2Q9HCS7 855 aaKnown RBP8.99□□□□□ -0.97
ATXN3-201ENST00000340660 UBQLN4Q9NRR5 601 aa8.99□□□□□ -0.97
ATXN3-201ENST00000340660 C19orf53Q9UNZ5 99 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-201ENST00000340660 NUP214P35658 2090 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-201ENST00000340660 APOBP04114 4563 aaKnown RBP8.98□□□□□ -0.97
ATXN3-201ENST00000340660 ZSCAN5BA6NJL1 495 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 H3BUX3 64 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 UPK1AO00322 258 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 ENSAO43768 121 aaKnown RBP8.98□□□□□ -0.97
ATXN3-201ENST00000340660 CHST1O43916 411 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 OR2B6P58173 313 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 TAS2R39P59534 338 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 PHEXP78562 749 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 MYL5Q02045 173 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 TEX35Q5T0J7 233 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 SULT1C3Q6IMI6 304 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 KCTD18Q6PI47 426 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-201ENST00000340660 MYLK4Q86YV6 388 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-201ENST00000340660 FAM9CQ8IZT9 166 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 Q8N2B8 174 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 CPEB3Q8NE35 698 aaKnown RBP8.98□□□□□ -0.97
ATXN3-201ENST00000340660 OR9K2Q8NGE7 335 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 MGARPQ8TDB4 240 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 C10orf82Q8WW14 230 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 EXOSC8Q96B26 276 aaKnown RBP8.98□□□□□ -0.97
ATXN3-201ENST00000340660 GPR78Q96P69 363 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 NPFFR1Q9GZQ6 430 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 EGLN1Q9GZT9 426 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 SIRPDQ9H106 197 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 OR51B6Q9H340 312 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 C3orf14Q9HBI5 128 aa8.98□□□□□ -0.97
ATXN3-201ENST00000340660 PAK5Q9P286 719 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms