RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 TFPIP10646 304 aa13.79□□□□□ -0.2
BRAT1-201ENST00000340611 CCL4P13236 92 aa13.79□□□□□ -0.2
BRAT1-201ENST00000340611 STX4Q12846 297 aa13.79□□□□□ -0.2
BRAT1-201ENST00000340611 FAM53BQ14153 422 aa13.79□□□□□ -0.2
BRAT1-201ENST00000340611 PLA2G2CQ5R387 149 aa13.79□□□□□ -0.2
BRAT1-201ENST00000340611 PODNL1Q6PEZ8 512 aa13.79□□□□□ -0.2
BRAT1-201ENST00000340611 COMTD1Q86VU5 262 aa13.79□□□□□ -0.2
BRAT1-201ENST00000340611 PDZD9Q8IXQ8 264 aa13.79□□□□□ -0.2
BRAT1-201ENST00000340611 NDC1Q9BTX1 674 aa13.79□□□□□ -0.2
BRAT1-201ENST00000340611 ENAMQ9NRM1 1142 aa13.79□□□□□ -0.2
BRAT1-201ENST00000340611 MYEF2Q9P2K5 600 aaKnown RBP13.79□□□□□ -0.2
BRAT1-201ENST00000340611 CLDN16Q9Y5I7 305 aa13.79□□□□□ -0.2
BRAT1-201ENST00000340611 MEIKINA0A087WXM9 373 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 OR6C68A6NDL8 312 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 G3V3Q6 166 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 CRYBA1P05813 215 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 ANKRD34CP0C6C1 535 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 MMP11P24347 488 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 GIPRP48546 466 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 FAM26EQ8N5C1 309 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 BPIFCQ8NFQ6 507 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 OR1S1Q8NH92 325 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 HSD17B8Q92506 261 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 PLA2G12AQ9BZM1 189 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 EGLN3Q9H6Z9 239 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 PRTFDC1Q9NRG1 225 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 GHRLQ9UBU3 117 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 SERTAD3Q9UJW9 196 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 MPTX1A8MV57 137 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 TCRBP04435 133 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 CELP19835 753 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 EEF1A1P68104 462 aaKnown RBP13.78□□□□□ -0.2
BRAT1-201ENST00000340611 MAP4K2Q12851 820 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 MLC1Q15049 377 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 CEBPEQ15744 281 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 ACER2Q5QJU3 275 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 EEF1A1P5Q5VTE0 462 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 BEND4Q6ZU67 534 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 NEIL3Q8TAT5 605 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 CDS1Q92903 461 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 NAT6Q93015 286 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 ZNF764Q96H86 408 aaPredicted RBP13.78□□□□□ -0.2
BRAT1-201ENST00000340611 OR7D2Q96RA2 312 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 SMAD5Q99717 465 aaKnown RBP13.78□□□□□ -0.2
BRAT1-201ENST00000340611 FBXO34Q9NWN3 711 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 TAS2R3Q9NYW6 316 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 SEC14L3Q9UDX4 400 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 MKL2Q9ULH7 1088 aa13.78□□□□□ -0.2
BRAT1-201ENST00000340611 C7orf66A4D0T2 115 aa13.77□□□□□ -0.2
BRAT1-201ENST00000340611 FITM1A5D6W6 292 aa13.77□□□□□ -0.2
BRAT1-201ENST00000340611 DISC1C4P0D8 188 aa13.77□□□□□ -0.2
BRAT1-201ENST00000340611 EMC8O43402 210 aa13.77□□□□□ -0.2
BRAT1-201ENST00000340611 FCMRO60667 390 aa13.77□□□□□ -0.2
BRAT1-201ENST00000340611 SPDEFO95238 335 aa13.77□□□□□ -0.2
BRAT1-201ENST00000340611 CHRM4P08173 479 aa13.77□□□□□ -0.2
BRAT1-201ENST00000340611 NR2F1P10589 423 aa13.77□□□□□ -0.2
BRAT1-201ENST00000340611 GPX4P36969 197 aaPredicted RBP13.77□□□□□ -0.2
BRAT1-201ENST00000340611 GAS1P54826 345 aa13.77□□□□□ -0.2
BRAT1-201ENST00000340611 TPBGQ13641 420 aa13.77□□□□□ -0.2
BRAT1-201ENST00000340611 TSC22D1Q15714 1073 aa13.77□□□□□ -0.2
BRAT1-201ENST00000340611 RABEPKQ7Z6M1 372 aa13.77□□□□□ -0.2
BRAT1-201ENST00000340611 ZNF321PQ8N8H1 164 aa13.77□□□□□ -0.2
BRAT1-201ENST00000340611 OR4D9Q8NGE8 314 aa13.77□□□□□ -0.2
BRAT1-201ENST00000340611 HGDQ93099 445 aa13.77□□□□□ -0.2
BRAT1-201ENST00000340611 PTCHD1Q96NR3 888 aa13.77□□□□□ -0.2
BRAT1-201ENST00000340611 TSNAXQ99598 290 aaKnown RBP13.77□□□□□ -0.2
BRAT1-201ENST00000340611 POLDIP3Q9BY77 421 aaKnown RBP13.77□□□□□ -0.2
BRAT1-201ENST00000340611 ANKRD19PQ9H560 264 aa13.77□□□□□ -0.2
BRAT1-201ENST00000340611 PTTG3PQ9NZH4 202 aa13.77□□□□□ -0.2
BRAT1-201ENST00000340611 NPIPA5A0A0B4J1W7 369 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 NPIPA7E9PJI5 369 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 GPR37O15354 613 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 ARPC5O15511 151 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 NTN1O95631 604 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 F12P00748 615 aaPredicted RBP13.77□□□□□ -0.21
BRAT1-201ENST00000340611 TFP02787 698 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 LIMS3P0CW19 117 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 LIMS4P0CW20 117 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 NPIPA8P0DM63 369 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 ELK1P19419 428 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 S100PP25815 95 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 PDX1P52945 283 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 DUSP8Q13202 625 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 SNTB1Q13884 538 aaKnown RBP13.77□□□□□ -0.21
BRAT1-201ENST00000340611 PRICKLE4Q2TBC4 344 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 ZNF791Q3KP31 576 aaPredicted RBP13.77□□□□□ -0.21
BRAT1-201ENST00000340611 CLEC12AQ5QGZ9 265 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 LCN10Q6JVE6 187 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 LYPD4Q6UWN0 246 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 OR4K5Q8NGD3 323 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 SLC35A4Q96G79 324 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 RNF32Q9H0A6 362 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 OR51M1Q9H341 326 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 DPAGT1Q9H3H5 408 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 GPN3Q9UHW5 284 aaPredicted RBP13.77□□□□□ -0.21
BRAT1-201ENST00000340611 DCHS1Q96JQ0 3298 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 METTL21EPA6NDL7 271 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 CH25HO95992 272 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 PNLIPP16233 465 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 GABRA5P31644 462 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms