RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 DGCR6Q14129 220 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 TAB1Q15750 504 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 STK11Q15831 433 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 FGD3Q5JSP0 725 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 PODNL1Q6PEZ8 512 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 MBOAT2Q6ZWT7 520 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 LINGO2Q7L985 606 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 RNF113BQ8IZP6 322 aaKnown RBP13.42□□□□□ -0.26
UBE3B-201ENST00000340074 TMEM123Q8N131 208 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 ANKK1Q8NFD2 765 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 OR52J3Q8NH60 311 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 HSD17B8Q92506 261 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 LURAP1Q96LR2 239 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 POLDIP3Q9BY77 421 aaKnown RBP13.42□□□□□ -0.26
UBE3B-201ENST00000340074 LINC00470Q9BZP3 86 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 NOTCH2Q04721 2471 aa13.42□□□□□ -0.26
UBE3B-201ENST00000340074 AKAP6Q13023 2319 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 TRBV4-1A0A0J9YWV2 114 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 HTR3EA5X5Y0 456 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 OR6C65A6NJZ3 312 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 DEFB108AA8MXU0 73 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 ZNF587BE7ETH6 402 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 ACOT8O14734 319 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 SLC43A1O75387 559 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 DNAJC8O75937 253 aaPredicted RBP13.41□□□□□ -0.26
UBE3B-201ENST00000340074 HRGP04196 525 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 TSPAN19P0C672 248 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 SAGP10523 405 aaPredicted RBP13.41□□□□□ -0.26
UBE3B-201ENST00000340074 MPGP29372 298 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 SPIBQ01892 262 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 RPL18Q07020 188 aaKnown RBP13.41□□□□□ -0.26
UBE3B-201ENST00000340074 GABRA6Q16445 453 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 CARD17Q5XLA6 110 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 PGM2L1Q6PCE3 622 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 RRM2BQ7LG56 351 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 ABHD12BQ7Z5M8 362 aaPredicted RBP13.41□□□□□ -0.26
UBE3B-201ENST00000340074 ZDHHC21Q8IVQ6 265 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 DHRS1Q96LJ7 313 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 LRGUKQ96M69 825 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 USB1Q9BQ65 265 aaKnown RBP13.41□□□□□ -0.26
UBE3B-201ENST00000340074 POLQO75417 2590 aa13.41□□□□□ -0.26
UBE3B-201ENST00000340074 OR5H1A6NKK0 313 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 ZNF726A6NNF4 738 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 KLF4O43474 513 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 GOSR1O95249 250 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 GADD45GO95257 159 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 STAMBPO95630 424 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 F13BP05160 661 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 CDH2P19022 906 aaPredicted RBP13.4□□□□□ -0.26
UBE3B-201ENST00000340074 AQP2P41181 271 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 GPR4P46093 362 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 BIDP55957 195 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 TRAP1Q12931 704 aaKnown RBP13.4□□□□□ -0.26
UBE3B-201ENST00000340074 CAMK2DQ13557 499 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 LAPTM4AQ15012 233 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 SEC23BQ15437 767 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 TIMM23BQ5SRD1 257 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 PHYHD1Q5SRE7 291 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 SLC35D2Q76EJ3 337 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 PIWIL3Q7Z3Z3 882 aaKnown RBP13.4□□□□□ -0.26
UBE3B-201ENST00000340074 GPR137CQ8N3F9 429 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 MOSPD2Q8NHP6 518 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 PIK3IP1Q96FE7 263 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 MUS81Q96NY9 551 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 FUZQ9BT04 418 aa13.4□□□□□ -0.26
UBE3B-201ENST00000340074 CADM1Q9BY67 442 aaKnown RBP13.4□□□□□ -0.26
UBE3B-201ENST00000340074 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-201ENST00000340074 EFCAB9A8MZ26 197 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 M0R3G1 203 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 GSC2O15499 205 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 ATP5HO75947 161 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 RRM2P31350 389 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 RASSF2P50749 326 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 RPS4XP62701 263 aaKnown RBP13.39□□□□□ -0.27
UBE3B-201ENST00000340074 ROR2Q01974 943 aaKnown RBP13.39□□□□□ -0.27
UBE3B-201ENST00000340074 TGFBR3Q03167 851 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 MELKQ14680 651 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 PPA1Q15181 289 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 OR7E24Q6IFN5 339 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 TMPRSS11FQ6ZWK6 438 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 P2RY8Q86VZ1 359 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 CDC20BQ86Y33 519 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 C20orf196Q8IYI0 205 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 CDK20Q8IZL9 346 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 C1orf162Q8NEQ5 155 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-201ENST00000340074 OR52N5Q8NH56 324 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 OR51A7Q8NH64 312 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 NRGNQ92686 78 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 MUCL1Q96DR8 90 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 FAM46AQ96IP4 442 aaKnown RBP13.39□□□□□ -0.27
UBE3B-201ENST00000340074 ZNF347Q96SE7 839 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 MAGIXQ9H6Y5 334 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 INIPQ9NRY2 104 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 HIF3AQ9Y2N7 669 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 RAI1Q7Z5J4 1906 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-201ENST00000340074 SPG11Q96JI7 2443 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 CADP27708 2225 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 TRAV27A0A087WT01 109 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 A0A1W2PPR1 153 aa13.39□□□□□ -0.27
UBE3B-201ENST00000340074 A0A1W2PR80 420 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms