RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 GPR139Q6DWJ6 353 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 CD200R1LQ6Q8B3 271 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 MDGA2Q7Z553 956 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 DDIT4LQ96D03 193 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 MRGPRX4Q96LA9 322 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 KCTD7Q96MP8 289 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 WDR70Q9NW82 654 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 P4HTMQ9NXG6 502 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 QPCTLQ9NXS2 382 aa20.21■□□□□ 0.83
PDLIM2-203ENST00000339162 A0A1W2PQ72 361 aa20.2■□□□□ 0.82
PDLIM2-203ENST00000339162 GABRPO00591 440 aa20.2■□□□□ 0.82
PDLIM2-203ENST00000339162 SLC25A1P53007 311 aa20.2■□□□□ 0.82
PDLIM2-203ENST00000339162 SLC3A1Q07837 685 aa20.2■□□□□ 0.82
PDLIM2-203ENST00000339162 PLEKHG7Q6ZR37 379 aa20.2■□□□□ 0.82
PDLIM2-203ENST00000339162 JSRP1Q96MG2 331 aaPredicted RBP20.2■□□□□ 0.82
PDLIM2-203ENST00000339162 GNRHR2Q96P88 292 aa20.2■□□□□ 0.82
PDLIM2-203ENST00000339162 PROK2Q9HC23 129 aa20.2■□□□□ 0.82
PDLIM2-203ENST00000339162 CPNE5Q9HCH3 593 aa20.2■□□□□ 0.82
PDLIM2-203ENST00000339162 HPF1Q9NWY4 346 aa20.2■□□□□ 0.82
PDLIM2-203ENST00000339162 MRPL39Q9NYK5 338 aaKnown RBP20.2■□□□□ 0.82
PDLIM2-203ENST00000339162 RPH3AQ9Y2J0 694 aaPredicted RBP20.2■□□□□ 0.82
PDLIM2-203ENST00000339162 CTDSP2O14595 271 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 XKRYO14609 159 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 TNFSF15O95150 251 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 RENP00797 406 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 RPS27P42677 84 aaKnown RBP20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 RPL27P61353 136 aaKnown RBP20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 DNASE1L3Q13609 305 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 C5orf46Q6UWT4 87 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 SNX33Q8WV41 574 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 NXPE2Q96DL1 559 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 UBL7Q96S82 380 aaPredicted RBP20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 NOX1Q9Y5S8 564 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 TRDV1A0A1B0GX56 115 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 MS4A18H0YCH9 400 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 ETV2O00321 342 aaPredicted RBP20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 HLA-DPB1P04440 258 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 GTF2E2P29084 291 aaKnown RBP20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 DLX5P56178 289 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 CAV3P56539 151 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 BDH1Q02338 343 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 RUNX1T1Q06455 604 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 CSRP2Q16527 193 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 MS4A18Q3C1V0 323 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 TMEM91Q6ZNR0 172 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 LINC00299Q6ZSB3 139 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 FADS6Q8N9I5 356 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 S100ZQ8WXG8 99 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 NCDNQ9UBB6 729 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 GNG8Q9UK08 70 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 PCDHGA1Q9Y5H4 931 aa20.19■□□□□ 0.82
PDLIM2-203ENST00000339162 ZNF208O43345 1280 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 AKR7A3O95154 331 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 SLC25A53Q5H9E4 307 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 SLC22A10Q63ZE4 541 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 PLCZ1Q86YW0 608 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 CROCCP3Q8IVE0 287 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 GPALPP1Q8IXQ4 340 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 ESX1Q8N693 406 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 DEFB124Q8NES8 71 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 OR2T4Q8NH00 348 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 MFSD8Q8NHS3 518 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 WDR12Q9GZL7 423 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 TXNIPQ9H3M7 391 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 PTGES2Q9H7Z7 377 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 FAM86C1Q9NVL1 165 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 PCDHGB7Q9Y5F8 929 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 DMXL1Q9Y485 3027 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 A0A1W2PNR3 127 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 SLC35F4A4IF30 521 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 PRR32B1ATL7 298 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 RORCP51449 518 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 PUDPQ08623 228 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 MYBPHQ13203 477 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 EIF3IQ13347 325 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 SNTA1Q13424 505 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 ZNF519Q8TB69 540 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 PAQR8Q8TEZ7 354 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 PELI1Q96FA3 418 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 FRMD6Q96NE9 622 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 WDR76Q9H967 626 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 ACOXLQ9NUZ1 547 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 GSTK1Q9Y2Q3 226 aa20.18■□□□□ 0.82
PDLIM2-203ENST00000339162 SHISA3A0PJX4 238 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 HPP00738 406 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 F10P00742 488 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 SHC1P29353 583 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 FGF9P31371 208 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 SFTPDP35247 375 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 TLE3Q04726 772 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 HNRNPA0Q13151 305 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 H1FNTQ75WM6 255 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 WDFY1Q8IWB7 410 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 THAP4Q8WY91 577 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 ANGPTL4Q9BY76 406 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 KLHDC2Q9Y2U9 406 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 A3GALT2U3KPV4 340 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 LOC101059948A0A1B0GTJ6 334 aa20.17■□□□□ 0.82
PDLIM2-203ENST00000339162 PRSS37A4D1T9 235 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms