RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 TM4SF19Q96DZ7 209 aa18.9■□□□□ 0.62
SPNS1-203ENST00000334536 SMIM10Q96HG1 83 aa18.9■□□□□ 0.62
SPNS1-203ENST00000334536 FGF22Q9HCT0 170 aa18.9■□□□□ 0.62
SPNS1-203ENST00000334536 TMEM138Q9NPI0 162 aa18.9■□□□□ 0.62
SPNS1-203ENST00000334536 PRSS38A1L453 326 aa18.89■□□□□ 0.61
SPNS1-203ENST00000334536 CD63P08962 238 aa18.89■□□□□ 0.61
SPNS1-203ENST00000334536 SLC35G6P0C7Q6 338 aa18.89■□□□□ 0.61
SPNS1-203ENST00000334536 ABCD3P28288 659 aa18.89■□□□□ 0.61
SPNS1-203ENST00000334536 TLX1P31314 330 aaPredicted RBP18.89■□□□□ 0.61
SPNS1-203ENST00000334536 RAB2AP61019 212 aa18.89■□□□□ 0.61
SPNS1-203ENST00000334536 SSX2Q16385 188 aa18.89■□□□□ 0.61
SPNS1-203ENST00000334536 ITPRIPL2Q3MIP1 535 aa18.89■□□□□ 0.61
SPNS1-203ENST00000334536 SFRP4Q6FHJ7 346 aaPredicted RBP18.89■□□□□ 0.61
SPNS1-203ENST00000334536 NHLRC1Q6VVB1 395 aa18.89■□□□□ 0.61
SPNS1-203ENST00000334536 ZNF836Q6ZNA1 936 aa18.89■□□□□ 0.61
SPNS1-203ENST00000334536 TMEM255BQ8WV15 326 aa18.89■□□□□ 0.61
SPNS1-203ENST00000334536 SMCO4Q9NRQ5 59 aa18.89■□□□□ 0.61
SPNS1-203ENST00000334536 RCE1Q9Y256 329 aa18.89■□□□□ 0.61
SPNS1-203ENST00000334536 NTNG1Q9Y2I2 539 aa18.89■□□□□ 0.61
SPNS1-203ENST00000334536 URADA6NGE7 173 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 GABARAPH6UMI1 98 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 TMEM127O75204 238 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 NTN1O95631 604 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 CH25HO95992 272 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 IGHV2-5P01817 119 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 GKN3PP0CG01 181 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 CSF2RBP32927 897 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 ART1P52961 327 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 INSL4Q14641 139 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 DNLZQ5SXM8 178 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 RANBP3LQ86VV4 465 aaPredicted RBP18.88■□□□□ 0.61
SPNS1-203ENST00000334536 KCNRGQ8N5I3 272 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 ZC3H10Q96K80 434 aaKnown RBP18.88■□□□□ 0.61
SPNS1-203ENST00000334536 FBRSQ9HAH7 460 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 SLC7A7Q9UM01 511 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 PCDHB10Q9UN67 800 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 A0A1B0GVC2 190 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 KANTRA0A1W2PQU2 76 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 UNC119BA6NIH7 251 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 A6NIN4 97 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 BLOC1S5-TXNDC5H3BN57 136 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 ICOSLGO75144 302 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 FABP9Q0Z7S8 132 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 KIR2DS3Q14952 304 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 OR2W3Q7Z3T1 314 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 POMGNT2Q8NAT1 580 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 SAMD8Q96LT4 415 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 OCSTAMPQ9BR26 566 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 C6orf106Q9H6K1 298 aaPredicted RBP18.88■□□□□ 0.61
SPNS1-203ENST00000334536 TBC1D29Q9UFV1 150 aa18.88■□□□□ 0.61
SPNS1-203ENST00000334536 J3QRE1 110 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 TNFSF14O43557 240 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 B3GALT2O43825 422 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 PIP5K1CO60331 668 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 OR2F2O95006 317 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 IFNA10P01566 189 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 RCC1P18754 421 aaPredicted RBP18.87■□□□□ 0.61
SPNS1-203ENST00000334536 SHC1P29353 583 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 ATP6V1E1P36543 226 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 KIR2DL1P43626 348 aaPredicted RBP18.87■□□□□ 0.61
SPNS1-203ENST00000334536 ZNF136P52737 540 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 ADPRHP54922 357 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 OR2F1Q13607 317 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 FBXO42Q6P3S6 717 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 PXKQ7Z7A4 578 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 DNAAF1Q8NEP3 725 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 CNTNAP3BQ96NU0 1288 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 SDF2Q99470 211 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 WDR77Q9BQA1 342 aaPredicted RBP18.87■□□□□ 0.61
SPNS1-203ENST00000334536 TWSG1Q9GZX9 223 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 UBQLN3Q9H347 655 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 SRMSQ9H3Y6 488 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 KLHL9Q9P2J3 617 aa18.87■□□□□ 0.61
SPNS1-203ENST00000334536 C19orf53Q9UNZ5 99 aaPredicted RBP18.87■□□□□ 0.61
SPNS1-203ENST00000334536 BCL2L11O43521 198 aa18.86■□□□□ 0.61
SPNS1-203ENST00000334536 ATP1B1P05026 303 aa18.86■□□□□ 0.61
SPNS1-203ENST00000334536 DBIP07108 87 aaKnown RBP18.86■□□□□ 0.61
SPNS1-203ENST00000334536 ZNF35P13682 527 aa18.86■□□□□ 0.61
SPNS1-203ENST00000334536 ZNF10P21506 573 aaPredicted RBP18.86■□□□□ 0.61
SPNS1-203ENST00000334536 RPS4Y1P22090 263 aaKnown RBP18.86■□□□□ 0.61
SPNS1-203ENST00000334536 HTR5AP47898 357 aa18.86■□□□□ 0.61
SPNS1-203ENST00000334536 ILF3Q12906 894 aaKnown RBP eCLIP18.86■□□□□ 0.617e-7■■□□□ 13.2
SPNS1-203ENST00000334536 CHAF1BQ13112 559 aa18.86■□□□□ 0.61
SPNS1-203ENST00000334536 DUSP5Q16690 384 aa18.86■□□□□ 0.61
SPNS1-203ENST00000334536 RNASE12Q5GAN4 147 aaKnown RBP18.86■□□□□ 0.61
SPNS1-203ENST00000334536 UBE2NLQ5JXB2 153 aa18.86■□□□□ 0.61
SPNS1-203ENST00000334536 EXOSC6Q5RKV6 272 aaKnown RBP18.86■□□□□ 0.61
SPNS1-203ENST00000334536 ZNF813Q6ZN06 617 aa18.86■□□□□ 0.61
SPNS1-203ENST00000334536 OR2AK2Q8NG84 335 aa18.86■□□□□ 0.61
SPNS1-203ENST00000334536 MRPL38Q96DV4 380 aaKnown RBP18.86■□□□□ 0.61
SPNS1-203ENST00000334536 GINS4Q9BRT9 223 aa18.86■□□□□ 0.61
SPNS1-203ENST00000334536 ZNF350Q9GZX5 532 aa18.86■□□□□ 0.61
SPNS1-203ENST00000334536 HINT3Q9NQE9 182 aaKnown RBP18.86■□□□□ 0.61
SPNS1-203ENST00000334536 DHCR7Q9UBM7 475 aaKnown RBP18.86■□□□□ 0.61
SPNS1-203ENST00000334536 ZNF223Q9UK11 482 aaPredicted RBP18.86■□□□□ 0.61
SPNS1-203ENST00000334536 MDC1Q14676 2089 aaKnown RBP18.86■□□□□ 0.61
SPNS1-203ENST00000334536 DOCK9Q9BZ29 2069 aa18.86■□□□□ 0.61
SPNS1-203ENST00000334536 TBC1D3DA0A087WVF3 549 aa18.86■□□□□ 0.61
SPNS1-203ENST00000334536 TBC1D3IA0A087WXS9 549 aa18.86■□□□□ 0.61
SPNS1-203ENST00000334536 TBC1D3EA0A087X179 549 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms