RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 H3BMQ9 156 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 DOK2O60496 412 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 KNG1P01042 644 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 ARSKQ6UWY0 536 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 VASH1Q7L8A9 365 aaPredicted RBP13.78□□□□□ -0.2
C9orf47-201ENST00000334490 BCDIN3DQ7Z5W3 292 aaKnown RBP13.78□□□□□ -0.2
C9orf47-201ENST00000334490 TXNDC15Q96J42 360 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 COG8Q96MW5 612 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 PRRX2Q99811 253 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 IKZF5Q9H5V7 419 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 APMAPQ9HDC9 416 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 RABL2AQ9UBK7 228 aaPredicted RBP13.78□□□□□ -0.2
C9orf47-201ENST00000334490 RABL2BQ9UNT1 228 aa13.78□□□□□ -0.2
C9orf47-201ENST00000334490 NRXN2Q9P2S2 1712 aa13.77□□□□□ -0.2
C9orf47-201ENST00000334490 IL2RAP01589 272 aa13.77□□□□□ -0.2
C9orf47-201ENST00000334490 FCGR2AP12318 317 aa13.77□□□□□ -0.2
C9orf47-201ENST00000334490 GABRA2P47869 451 aa13.77□□□□□ -0.2
C9orf47-201ENST00000334490 PPP5CP53041 499 aa13.77□□□□□ -0.2
C9orf47-201ENST00000334490 MTCP1P56278 107 aa13.77□□□□□ -0.2
C9orf47-201ENST00000334490 SELENBP1Q13228 472 aa13.77□□□□□ -0.2
C9orf47-201ENST00000334490 ZNF684Q5T5D7 378 aa13.77□□□□□ -0.2
C9orf47-201ENST00000334490 PIWIL3Q7Z3Z3 882 aaKnown RBP13.77□□□□□ -0.2
C9orf47-201ENST00000334490 SYNPRQ8TBG9 265 aa13.77□□□□□ -0.2
C9orf47-201ENST00000334490 HSPB11Q9Y547 144 aa13.77□□□□□ -0.2
C9orf47-201ENST00000334490 ALG5Q9Y673 324 aa13.77□□□□□ -0.2
C9orf47-201ENST00000334490 PLXNB2O15031 1838 aa13.77□□□□□ -0.2
C9orf47-201ENST00000334490 DOCK5Q9H7D0 1870 aa13.77□□□□□ -0.2
C9orf47-201ENST00000334490 RAB3DO95716 219 aa13.77□□□□□ -0.21
C9orf47-201ENST00000334490 RPL27P61353 136 aaKnown RBP13.77□□□□□ -0.21
C9orf47-201ENST00000334490 CCBE1Q6UXH8 406 aaPredicted RBP13.77□□□□□ -0.21
C9orf47-201ENST00000334490 COX15Q7KZN9 410 aa13.77□□□□□ -0.21
C9orf47-201ENST00000334490 ZC3HAV1LQ96H79 300 aaKnown RBP13.77□□□□□ -0.21
C9orf47-201ENST00000334490 NIPAL2Q9H841 368 aa13.77□□□□□ -0.21
C9orf47-201ENST00000334490 A8MV72 311 aaPredicted RBP13.77□□□□□ -0.21
C9orf47-201ENST00000334490 SLC33A1O00400 549 aaPredicted RBP13.77□□□□□ -0.21
C9orf47-201ENST00000334490 CREBL2O60519 120 aaPredicted RBP13.77□□□□□ -0.21
C9orf47-201ENST00000334490 UQCRC1P31930 480 aa13.77□□□□□ -0.21
C9orf47-201ENST00000334490 ZNF687Q8N1G0 1237 aa13.77□□□□□ -0.21
C9orf47-201ENST00000334490 GDPD1Q8N9F7 314 aa13.77□□□□□ -0.21
C9orf47-201ENST00000334490 IL1F10Q8WWZ1 152 aa13.77□□□□□ -0.21
C9orf47-201ENST00000334490 ZNF419Q96HQ0 510 aaPredicted RBP13.77□□□□□ -0.21
C9orf47-201ENST00000334490 GDF15Q99988 308 aa13.77□□□□□ -0.21
C9orf47-201ENST00000334490 ACER3Q9NUN7 267 aa13.77□□□□□ -0.21
C9orf47-201ENST00000334490 CLEC1BQ9P126 229 aa13.77□□□□□ -0.21
C9orf47-201ENST00000334490 CDHR4A6H8M9 788 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 A6NIN4 97 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 COQ8AQ8NI60 647 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 GRPEL2Q8TAA5 225 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 KCNE4Q8WWG9 221 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 GHSRQ92847 366 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 GATA6Q92908 595 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 TMEM106AQ96A25 262 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 MIB2Q96AX9 1013 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 BCL2L10Q9HD36 194 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 CHST11Q9NPF2 352 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 COA3Q9Y2R0 106 aaPredicted RBP13.76□□□□□ -0.21
C9orf47-201ENST00000334490 TMEM212A6NML5 194 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 B4DXG7 233 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 CXCL13O43927 109 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 OR7C1O76099 320 aaPredicted RBP13.76□□□□□ -0.21
C9orf47-201ENST00000334490 EFNA3P52797 238 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 MCCD1P59942 119 aaPredicted RBP13.76□□□□□ -0.21
C9orf47-201ENST00000334490 SLX4IPQ5VYV7 408 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 ST8SIA1Q92185 356 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 WWTR1Q9GZV5 400 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 RGPD4Q7Z3J3 1758 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 CDK4P11802 303 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 HTR1FP30939 366 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 HSF1Q00613 529 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 ASCC1Q8N9N2 400 aaKnown RBP13.76□□□□□ -0.21
C9orf47-201ENST00000334490 GJC3Q8NFK1 279 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 ADAMTS14Q8WXS8 1223 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 HSD17B8Q92506 261 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 ZNF471Q9BX82 626 aaPredicted RBP13.76□□□□□ -0.21
C9orf47-201ENST00000334490 FRG2CA6NGY1 282 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 GABRPO00591 440 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 P2RX6O15547 441 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 BPNT1O95861 308 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 RBM39Q14498 530 aaKnown RBP13.76□□□□□ -0.21
C9orf47-201ENST00000334490 PRTGQ2VWP7 1150 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 CMTM1Q8IZ96 169 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 CCDC32Q9BV29 185 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 NUDT9Q9BW91 350 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 P4HTMQ9NXG6 502 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 CNOT1A5YKK6 2376 aaKnown RBP13.76□□□□□ -0.21
C9orf47-201ENST00000334490 WNK3Q9BYP7 1800 aa13.76□□□□□ -0.21
C9orf47-201ENST00000334490 MEIS3P1A6NDR6 274 aa13.75□□□□□ -0.21
C9orf47-201ENST00000334490 CBX7O95931 251 aa13.75□□□□□ -0.21
C9orf47-201ENST00000334490 IFNA7P01567 189 aa13.75□□□□□ -0.21
C9orf47-201ENST00000334490 MSL3P1P0C860 447 aa13.75□□□□□ -0.21
C9orf47-201ENST00000334490 PRPH2P23942 346 aa13.75□□□□□ -0.21
C9orf47-201ENST00000334490 ENTHD1Q8IYW4 607 aa13.75□□□□□ -0.21
C9orf47-201ENST00000334490 SLC43A2Q8N370 569 aa13.75□□□□□ -0.21
C9orf47-201ENST00000334490 MGAT4CQ9UBM8 478 aa13.75□□□□□ -0.21
C9orf47-201ENST00000334490 PSORS1C1Q9UIG5 152 aa13.75□□□□□ -0.21
C9orf47-201ENST00000334490 PCDHGA1Q9Y5H4 931 aa13.75□□□□□ -0.21
C9orf47-201ENST00000334490 ZNF736B4DX44 427 aaPredicted RBP13.75□□□□□ -0.21
C9orf47-201ENST00000334490 TNFSF14O43557 240 aa13.75□□□□□ -0.21
C9orf47-201ENST00000334490 TOXO94900 526 aa13.75□□□□□ -0.21
C9orf47-201ENST00000334490 WNT11O96014 354 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms