RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 PLPP3O14495 311 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 OR2T1O43869 369 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 SC5DO75845 299 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 DKK1O94907 266 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 IL11P20809 199 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 CCKBRP32239 447 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 HSF2Q03933 536 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 CDK5R1Q15078 307 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 ACKR1Q16570 336 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 SLC16A9Q7RTY1 509 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 TIGD4Q8IY51 512 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 PM20D2Q8IYS1 436 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 ZNF417Q8TAU3 575 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 ARL5BQ96KC2 179 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 IMMP1LQ96LU5 166 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 ZNF587Q96SQ5 575 aaPredicted RBP16.58■□□□□ 0.24
CCDC43-201ENST00000315286 CCDC32Q9BV29 185 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 METTL7AQ9H8H3 244 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 PPP4R1LQ9P1A2 415 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 TVP23AA6NH52 213 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 SHISA8B8ZZ34 492 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 OR6A2O95222 327 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 PSMB10P40306 273 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 APOBEC1P41238 236 aaKnown RBP16.57■□□□□ 0.24
CCDC43-201ENST00000315286 BCAP31P51572 246 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 RPL27P61353 136 aaKnown RBP16.57■□□□□ 0.24
CCDC43-201ENST00000315286 FOXF1Q12946 379 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 NTRK2Q16620 822 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 ACSM3Q53FZ2 586 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 EEF1A1P5Q5VTE0 462 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 C5orf46Q6UWT4 87 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 MS4A15Q8N5U1 240 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 SMIM19Q96E16 107 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 SPACA9Q96E40 222 aaPredicted RBP16.57■□□□□ 0.24
CCDC43-201ENST00000315286 DIRAS2Q96HU8 199 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 CMKLR1Q99788 373 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 KLHDC2Q9Y2U9 406 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 PCDHGB2Q9Y5G2 931 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 HS3ST3B1Q9Y662 390 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 COX6A1P12074 109 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 GDI2P50395 445 aaKnown RBP16.57■□□□□ 0.24
CCDC43-201ENST00000315286 DLX5P56178 289 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 INPP5JQ15735 1006 aaPredicted RBP16.57■□□□□ 0.24
CCDC43-201ENST00000315286 GLYR1Q49A26 553 aaPredicted RBP16.57■□□□□ 0.24
CCDC43-201ENST00000315286 ZNF684Q5T5D7 378 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 RPL22L1Q6P5R6 122 aaKnown RBP16.57■□□□□ 0.24
CCDC43-201ENST00000315286 PXKQ7Z7A4 578 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 OR2Y1Q8NGV0 311 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 ZNF700Q9H0M5 742 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 MRPL39Q9NYK5 338 aaKnown RBP16.57■□□□□ 0.24
CCDC43-201ENST00000315286 WIF1Q9Y5W5 379 aa16.57■□□□□ 0.24
CCDC43-201ENST00000315286 TRBV2A0A0J9YWF9 115 aa16.56■□□□□ 0.24
CCDC43-201ENST00000315286 B4E171 279 aa16.56■□□□□ 0.24
CCDC43-201ENST00000315286 XKRYO14609 159 aa16.56■□□□□ 0.24
CCDC43-201ENST00000315286 FLRT2O43155 660 aa16.56■□□□□ 0.24
CCDC43-201ENST00000315286 ITGA10O75578 1167 aa16.56■□□□□ 0.24
CCDC43-201ENST00000315286 GPANK1O95872 356 aa16.56■□□□□ 0.24
CCDC43-201ENST00000315286 TSPAN7P41732 249 aa16.56■□□□□ 0.24
CCDC43-201ENST00000315286 CASP3P42574 277 aa16.56■□□□□ 0.24
CCDC43-201ENST00000315286 CCDC157Q569K6 752 aa16.56■□□□□ 0.24
CCDC43-201ENST00000315286 FAM131AQ6UXB0 335 aa16.56■□□□□ 0.24
CCDC43-201ENST00000315286 OR8H2Q8N162 312 aa16.56■□□□□ 0.24
CCDC43-201ENST00000315286 KDM8Q8N371 416 aa16.56■□□□□ 0.24
CCDC43-201ENST00000315286 ZNF519Q8TB69 540 aa16.56■□□□□ 0.24
CCDC43-201ENST00000315286 MRPL48Q96GC5 212 aaKnown RBP16.56■□□□□ 0.24
CCDC43-201ENST00000315286 ADAD1Q96M93 576 aaKnown RBP16.56■□□□□ 0.24
CCDC43-201ENST00000315286 SRRQ9GZT4 340 aa16.56■□□□□ 0.24
CCDC43-201ENST00000315286 TXNIPQ9H3M7 391 aa16.56■□□□□ 0.24
CCDC43-201ENST00000315286 IGLV3-32A0A0A0MS00 114 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 FABP12A6NFH5 140 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 EFNA2O43921 213 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 HPGDSO60760 199 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 EDNRAP25101 427 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 AZGP1P25311 298 aaKnown RBP16.55■□□□□ 0.24
CCDC43-201ENST00000315286 MSX1P28360 303 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 SP140LQ9H930 580 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 SDHAF3Q9NRP4 125 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 CACNA1CQ13936 2221 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 PRSS37A4D1T9 235 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 ANKRD33BA6NCL7 494 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 ETV2O00321 342 aaPredicted RBP16.55■□□□□ 0.24
CCDC43-201ENST00000315286 AKR7A3O95154 331 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 HLA-DOBP13765 273 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 PPP3R1P63098 170 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 OR7A5Q15622 319 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 BAK1Q16611 211 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 CCDC58Q4VC31 144 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 CDC20BQ86Y33 519 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 OR6S1Q8NH40 331 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 HTRA1Q92743 480 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 RNF166Q96A37 237 aaPredicted RBP16.55■□□□□ 0.24
CCDC43-201ENST00000315286 PDCD1LG2Q9BQ51 273 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 WDR76Q9H967 626 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 TIGARQ9NQ88 270 aa16.55■□□□□ 0.24
CCDC43-201ENST00000315286 MS4A18H0YCH9 400 aa16.54■□□□□ 0.24
CCDC43-201ENST00000315286 AVPR2P30518 371 aa16.54■□□□□ 0.24
CCDC43-201ENST00000315286 ZNF41P51814 821 aaPredicted RBP16.54■□□□□ 0.24
CCDC43-201ENST00000315286 RPS11P62280 158 aaKnown RBP eCLIP16.54■□□□□ 0.24
CCDC43-201ENST00000315286 EXT1Q16394 746 aa16.54■□□□□ 0.24
CCDC43-201ENST00000315286 PLPPR5Q32ZL2 321 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms