RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 OR51S1Q8NGJ8 323 aa12.42□□□□□ -0.42
NPAS4-201ENST00000311034 OR6N2Q8NGY6 317 aa12.42□□□□□ -0.42
NPAS4-201ENST00000311034 HAVCR2Q8TDQ0 301 aa12.42□□□□□ -0.42
NPAS4-201ENST00000311034 SCARB1Q8WTV0 552 aa12.42□□□□□ -0.42
NPAS4-201ENST00000311034 C2orf42Q9NWW7 574 aa12.42□□□□□ -0.42
NPAS4-201ENST00000311034 THSD7BQ9C0I4 1608 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 KRBOX1C9JBD0 128 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 OR6A2O95222 327 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 NGFRP08138 427 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 CISD3P0C7P0 127 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 EMDP50402 254 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 RAG2P55895 527 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 DLX5P56178 289 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 NANOS3P60323 173 aaKnown RBP12.41□□□□□ -0.42
NPAS4-201ENST00000311034 RPS11P62280 158 aaKnown RBP eCLIP12.41□□□□□ -0.42
NPAS4-201ENST00000311034 PPP2CBP62714 309 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 PPP2CAP67775 309 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 ZIC1Q15915 447 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 OR7E24Q6IFN5 339 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 FAM220AQ7Z4H9 259 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 FOXRED2Q8IWF2 684 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 TSEN15Q8WW01 171 aaKnown RBP12.41□□□□□ -0.42
NPAS4-201ENST00000311034 DMRTA2Q96SC8 542 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 FOXJ3Q9UPW0 622 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 ACOT7O00154 380 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 AIPO00170 330 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 SC5DO75845 299 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 PPP3CBP16298 524 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 DUSP8Q13202 625 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 GPM6BQ13491 265 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 NKPD1Q17RQ9 610 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 RPL13AP3Q6NVV1 102 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 LEG1Q6P5S2 330 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 USP53Q70EK8 1073 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 OVCH1Q7RTY7 1134 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 Q96M85 177 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 TCEAL2Q9H3H9 227 aaPredicted RBP12.41□□□□□ -0.42
NPAS4-201ENST00000311034 TAS2R5Q9NYW4 299 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 FLRT3Q9NZU0 649 aa12.41□□□□□ -0.42
NPAS4-201ENST00000311034 FGF17O60258 216 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 OR2T7P0C7T2 308 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 HOXB2P14652 356 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 PEBP1P30086 187 aaKnown RBP12.4□□□□□ -0.42
NPAS4-201ENST00000311034 RUNX2Q13950 521 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 TMEM88Q6PEY1 159 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 LILRA6Q6PI73 481 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 MUC20Q8N307 709 aaPredicted RBP12.4□□□□□ -0.42
NPAS4-201ENST00000311034 OR52R1Q8NGF1 315 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 OR52H1Q8NGJ2 320 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 OR4C16Q8NGL9 310 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 OR2L8Q8NGY9 312 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 OR2T27Q8NH04 317 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 SPPL3Q8TCT6 385 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 LRRC46Q96FV0 321 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 GFI1Q99684 422 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 CHST6Q9GZX3 395 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 NPDC1Q9NQX5 325 aaPredicted RBP12.4□□□□□ -0.42
NPAS4-201ENST00000311034 LRRK1Q38SD2 2015 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 NOTCH4Q99466 2003 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 CACNA1DQ01668 2161 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 CDC40O60508 579 aaKnown RBP eCLIP12.4□□□□□ -0.42
NPAS4-201ENST00000311034 AGR2O95994 175 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 EGFP01133 1207 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 APODP05090 189 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 TNFRSF17Q02223 184 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 LTBQ06643 244 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 RUNX3Q13761 415 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 ZNF626Q68DY1 528 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 RNF113BQ8IZP6 322 aaKnown RBP12.4□□□□□ -0.42
NPAS4-201ENST00000311034 OR51D1Q8NGF3 324 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 OR10K1Q8NGX5 313 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 FAM46BQ96A09 425 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 COX14Q96I36 57 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 DPYSL5Q9BPU6 564 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 JAM3Q9BX67 310 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 SLC7A5P2Q9GIP4 190 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 PCDHB16Q9NRJ7 776 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 CENPMQ9NSP4 180 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 ZNF281Q9Y2X9 895 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 NAP1L6A6NFF2 107 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 FAM74A7A6NL05 159 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 ELOA3DA6NLF2 546 aaPredicted RBP12.4□□□□□ -0.42
NPAS4-201ENST00000311034 GSTZ1O43708 216 aaPredicted RBP12.4□□□□□ -0.42
NPAS4-201ENST00000311034 NDUFB2O95178 105 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 MYF5P13349 255 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 FAUP35544 74 aaKnown RBP12.4□□□□□ -0.42
NPAS4-201ENST00000311034 POU4F2Q12837 409 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 TDGQ13569 410 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 ELOA3BQ3SY89 546 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 FAM74A3Q4VXF1 159 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 PWWP2BQ6NUJ5 590 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 CHST4Q8NCG5 386 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 TMIEQ8NEW7 156 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 ELOA3Q8NG57 546 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 SEC22AQ96IW7 307 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 ZNF416Q9BWM5 594 aa12.4□□□□□ -0.42
NPAS4-201ENST00000311034 DCDC2BA2VCK2 349 aa12.39□□□□□ -0.43
NPAS4-201ENST00000311034 CCSO14618 274 aa12.39□□□□□ -0.43
NPAS4-201ENST00000311034 P2RX6O15547 441 aa12.39□□□□□ -0.43
NPAS4-201ENST00000311034 CTSVO60911 334 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms